Variant report

Variant rs880245
Chromosome Location chr6:150167398-150167399
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:150073800-150182400 Weak transcription Fetal Brain Male brain
2 chr6:150105800-150176400 Weak transcription H9 Cell Line embryonic stem cell
3 chr6:150152800-150172600 Weak transcription Aorta Aorta
4 chr6:150153000-150167800 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr6:150155800-150182600 Weak transcription Dnd41 blood
6 chr6:150156400-150168400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr6:150158800-150176400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr6:150159200-150172800 Weak transcription Spleen Spleen
9 chr6:150161400-150168200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:150162000-150167400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr6:150162200-150167400 Weak transcription HUVEC blood vessel
12 chr6:150162200-150168400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr6:150162200-150175800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr6:150162600-150168200 Weak transcription Brain Substantia Nigra brain
15 chr6:150162600-150168200 Weak transcription Fetal Intestine Large intestine
16 chr6:150162600-150172000 Weak transcription Liver Liver
17 chr6:150162600-150177200 Weak transcription Fetal Lung lung
18 chr6:150163400-150169200 Enhancers Placenta Placenta
19 chr6:150163600-150175800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr6:150164200-150168200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:150164200-150171800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:150164400-150167400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:150164400-150167400 Genic enhancers NHLF lung
24 chr6:150164400-150168400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr6:150164400-150169000 Weak transcription Ovary ovary
26 chr6:150164400-150181800 Weak transcription Brain Germinal Matrix brain
27 chr6:150164600-150167400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:150164600-150167400 Weak transcription HepG2 liver
29 chr6:150164600-150169600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr6:150164800-150168200 Enhancers Muscle Satellite Cultured Cells --
31 chr6:150164800-150168200 Enhancers NH-A brain
32 chr6:150164800-150169400 Enhancers HMEC breast
33 chr6:150165000-150181800 Weak transcription Fetal Brain Female brain
34 chr6:150165400-150167400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:150165400-150167600 Genic enhancers NHEK skin
36 chr6:150165400-150167800 Genic enhancers Fetal Stomach stomach
37 chr6:150165400-150168600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr6:150165400-150168800 Enhancers Stomach Smooth Muscle stomach
39 chr6:150166000-150167400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:150166000-150167600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:150166000-150169200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr6:150166000-150169400 Enhancers Brain Angular Gyrus brain
43 chr6:150166200-150167400 Genic enhancers A549 lung
44 chr6:150166200-150169200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr6:150166200-150169400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr6:150166400-150167400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr6:150166400-150168800 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr6:150166400-150169600 Enhancers Placenta Amnion Placenta Amnion
49 chr6:150166600-150168800 Enhancers Skeletal Muscle Male skeletal muscle
50 chr6:150166800-150167400 Enhancers Hela-S3 cervix

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