Variant report

Variant	rs9689723
Chromosome Location	chr6:149977071-149977072
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:149975570..149978303-chr6:149981786..149983457,2	MCF-7	breast:
2	chr6:149976600..149978666-chr6:149982921..149985539,2	K562	blood:
3	chr6:149968362..149971588-chr6:149975848..149977502,3	K562	blood:
4	chr6:149968503..149970846-chr6:149975810..149979709,4	K562	blood:

Variant related genes	Relation type
ENSG00000186625	Chromatin interaction

Extended variants
information (count: 360 )
Associated
traits (count: 24 )

rSNPs within LD-proxies of this variant (count:356)

rs_ID	r²[population]
rs10214845	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes]
rs10452626	0.86[EUR][1000 genomes]
rs10457850	0.86[EUR][1000 genomes]
rs10457851	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs10485097	0.81[CHB][hapmap]
rs10747275	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10747276	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10782310	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.89[YRI][hapmap];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782311	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782312	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782313	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782314	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782315	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782316	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782317	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782318	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1080670	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10872643	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10872644	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10872645	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10872646	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10872647	0.95[CEU][hapmap];0.90[EUR][1000 genomes]
rs10872648	0.90[EUR][1000 genomes]
rs10872649	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10872650	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10872651	0.89[EUR][1000 genomes]
rs10872652	0.86[EUR][1000 genomes]
rs10872653	0.83[EUR][1000 genomes]
rs10872656	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs1108889	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[TSI][hapmap]
rs1112729	0.86[EUR][1000 genomes]
rs1112730	0.95[CEU][hapmap];0.86[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs11155662	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155668	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155669	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11155671	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11155672	0.80[EUR][1000 genomes]
rs11155674	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11155675	0.90[EUR][1000 genomes]
rs11155676	0.88[EUR][1000 genomes]
rs11155677	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155679	0.90[EUR][1000 genomes]
rs11155680	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155681	0.80[EUR][1000 genomes]
rs11155682	0.81[EUR][1000 genomes]
rs11155683	0.84[EUR][1000 genomes]
rs11155685	0.95[CEU][hapmap];0.87[CHB][hapmap];0.86[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.85[EUR][1000 genomes]
rs11155689	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs1125	0.95[CEU][hapmap];0.91[TSI][hapmap];0.94[EUR][1000 genomes]
rs1125107	0.87[CHB][hapmap]
rs12111376	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12174349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12174716	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12175504	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12175575	0.86[EUR][1000 genomes]
rs12176034	0.91[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap]
rs12178310	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12179031	0.84[EUR][1000 genomes]
rs12182220	0.81[EUR][1000 genomes]
rs12183664	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12191643	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12193364	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12195866	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12200670	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12201033	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12203703	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12205092	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12206402	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12210605	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs12211511	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12213779	0.86[EUR][1000 genomes]
rs12234128	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.85[YRI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12523793	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12524946	0.81[CHB][hapmap]
rs12525871	0.86[EUR][1000 genomes]
rs12526675	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12528279	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12529698	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12660304	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12662162	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12662174	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12665533	0.81[CHB][hapmap]
rs13215691	0.81[EUR][1000 genomes]
rs1413654	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes]
rs1413655	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap]
rs1474640	0.81[CHB][hapmap]
rs1572229	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17672976	0.86[EUR][1000 genomes]
rs17673294	0.80[EUR][1000 genomes]
rs17745062	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1934534	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2064520	0.93[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2064521	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2065663	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2065664	0.95[CEU][hapmap];0.80[CHB][hapmap];0.88[JPT][hapmap];0.81[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes]
rs2095375	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs2144207	0.85[EUR][1000 genomes]
rs2151909	0.80[EUR][1000 genomes]
rs2151913	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.89[TSI][hapmap];0.81[EUR][1000 genomes]
rs2184369	0.85[EUR][1000 genomes]
rs2184370	0.84[EUR][1000 genomes]
rs2185352	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.82[YRI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2275045	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs2275046	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs2297928	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2297930	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2297932	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2341551	0.81[CHB][hapmap]
rs2341768	0.81[CHB][hapmap]
rs2342764	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.84[EUR][1000 genomes]
rs2342857	0.81[EUR][1000 genomes]
rs2342858	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs2342860	0.85[EUR][1000 genomes]
rs2342861	0.85[EUR][1000 genomes]
rs2880075	0.81[CHB][hapmap]
rs34157004	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34337297	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35031906	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35443312	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35763894	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35830138	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35961297	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35967444	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3734295	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3763161	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3763162	0.95[CEU][hapmap];0.87[CHB][hapmap];0.86[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.81[EUR][1000 genomes]
rs3763163	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.81[EUR][1000 genomes]
rs3777949	0.93[ASW][hapmap];0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.91[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.93[YRI][hapmap];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3798761	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3805748	0.85[EUR][1000 genomes]
rs3805749	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes]
rs3805750	0.81[EUR][1000 genomes]
rs3805751	0.81[EUR][1000 genomes]
rs3805752	0.84[EUR][1000 genomes]
rs3805753	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs3828700	0.81[EUR][1000 genomes]
rs3924871	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4039600	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4242279	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs4354168	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4380763	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4421206	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4455682	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4552	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs4642491	0.85[EUR][1000 genomes]
rs4816	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.81[EUR][1000 genomes]
rs4869730	0.81[EUR][1000 genomes]
rs4869731	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs4869812	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4869923	0.84[EUR][1000 genomes]
rs4869966	0.86[EUR][1000 genomes]
rs4870019	0.80[EUR][1000 genomes]
rs4870020	0.80[EUR][1000 genomes]
rs4870049	0.84[EUR][1000 genomes]
rs4870050	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs4870052	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs4870054	0.95[CEU][hapmap];0.86[TSI][hapmap]
rs4870139	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4870144	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4870267	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870388	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4870493	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4870509	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4870529	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4897137	0.81[CHB][hapmap]
rs4897138	0.81[CHB][hapmap]
rs55763431	0.85[EUR][1000 genomes]
rs55849538	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55938765	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55993747	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56091542	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56103941	0.84[EUR][1000 genomes]
rs56374774	0.85[EUR][1000 genomes]
rs56397000	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57938011	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58189451	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60424881	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62439782	0.81[AMR][1000 genomes]
rs62439784	0.89[AMR][1000 genomes]
rs62439811	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62439836	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62439837	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62439840	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62439842	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62439843	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62441279	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62441284	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62441303	0.86[EUR][1000 genomes]
rs62441335	0.81[EUR][1000 genomes]
rs66516768	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6899661	0.81[EUR][1000 genomes]
rs6903998	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs6913486	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6914319	0.81[EUR][1000 genomes]
rs6936395	0.81[EUR][1000 genomes]
rs7381555	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7450246	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7738696	1.00[CEU][hapmap];0.87[CHB][hapmap]
rs7740278	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7740784	0.84[EUR][1000 genomes]
rs7744015	0.85[EUR][1000 genomes]
rs7744105	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[TSI][hapmap]
rs7752089	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.84[EUR][1000 genomes]
rs7752594	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7753812	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7754399	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7764846	0.80[EUR][1000 genomes]
rs7767622	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7769115	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[TSI][hapmap]
rs7818	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.93[TSI][hapmap];0.80[EUR][1000 genomes]
rs868375	0.95[CEU][hapmap]
rs880245	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[TSI][hapmap]
rs880246	1.00[CEU][hapmap];0.92[CHB][hapmap]
rs9027	0.85[CHB][hapmap];0.82[JPT][hapmap];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs909792	0.81[CHB][hapmap]
rs9285521	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.88[GIH][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9285522	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9285523	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9285524	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9286597	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9322184	0.81[CHB][hapmap]
rs9322188	0.87[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[TSI][hapmap];0.89[YRI][hapmap];0.93[ASN][1000 genomes]
rs9322189	0.87[CEU][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9322190	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9322192	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9322193	0.91[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9322194	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322196	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322197	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322198	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322199	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322200	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.85[YRI][hapmap];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322203	0.82[ASN][1000 genomes]
rs9322204	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322206	0.95[CEU][hapmap];0.80[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322207	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9322208	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9322209	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322210	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9322214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9322215	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9322217	0.88[EUR][1000 genomes]
rs9322218	0.95[CEU][hapmap];0.81[CHB][hapmap];0.82[JPT][hapmap];0.84[EUR][1000 genomes]
rs9322219	0.91[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.85[EUR][1000 genomes]
rs9322220	0.87[EUR][1000 genomes]
rs9322221	0.86[EUR][1000 genomes]
rs933055	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs9371199	0.84[EUR][1000 genomes]
rs9371201	0.95[CEU][hapmap];0.93[TSI][hapmap]
rs9372044	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.85[EUR][1000 genomes]
rs9377223	0.81[CHB][hapmap]
rs9377224	0.86[CHB][hapmap]
rs9377228	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9377229	0.91[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9377230	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9379314	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9379348	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9383546	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap]
rs9383812	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9383844	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9393132	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9393175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9397022	0.81[EUR][1000 genomes]
rs9397357	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs9399689	0.81[CHB][hapmap]
rs9399692	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9399693	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9404047	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9404048	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9406286	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9406345	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9406346	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9478291	1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9478848	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap]
rs9479094	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.84[MKK][hapmap];0.95[TSI][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9479494	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9479808	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes]
rs9479810	0.95[CEU][hapmap];0.86[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9480009	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9480031	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9485405	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9485408	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9498368	0.81[CHB][hapmap]
rs9498382	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9498383	0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9498384	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9505823	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9505824	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9505826	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9505967	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9505972	0.89[EUR][1000 genomes]
rs9505974	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs9505975	0.81[EUR][1000 genomes]
rs9505982	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9505983	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs952165	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap]
rs958953	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9688350	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9688412	0.95[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs9688452	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9688517	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9688699	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9688750	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9688794	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9688803	0.83[EUR][1000 genomes]
rs9688809	0.84[EUR][1000 genomes]
rs9688858	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9688861	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9688867	0.85[EUR][1000 genomes]
rs9688897	0.83[EUR][1000 genomes]
rs9688902	0.83[EUR][1000 genomes]
rs9688938	0.84[EUR][1000 genomes]
rs9688940	0.84[EUR][1000 genomes]
rs9689025	0.81[EUR][1000 genomes]
rs9689036	0.95[CEU][hapmap];0.86[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs9689084	0.93[ASW][hapmap];0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9689242	0.84[EUR][1000 genomes]
rs9689269	0.91[CEU][hapmap];0.86[CHB][hapmap];0.90[CHD][hapmap];0.88[JPT][hapmap];0.90[MEX][hapmap];0.95[TSI][hapmap];0.81[EUR][1000 genomes]
rs9689340	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9689447	0.82[EUR][1000 genomes]
rs9689599	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9689694	0.84[EUR][1000 genomes]
rs9689702	0.94[CHB][hapmap];0.94[JPT][hapmap];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9689716	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9717327	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9718079	0.93[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.94[JPT][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];0.89[YRI][hapmap];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9765861	0.82[EUR][1000 genomes]
rs9765929	0.86[EUR][1000 genomes]
rs9765965	0.85[EUR][1000 genomes]
rs9766004	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9766037	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9766214	0.85[EUR][1000 genomes]
rs9766444	0.85[EUR][1000 genomes]
rs9766525	0.87[EUR][1000 genomes]
rs9766562	0.91[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.83[EUR][1000 genomes]
rs9766886	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9767077	0.83[EUR][1000 genomes]
rs9767105	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9767113	0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767122	1.00[CEU][hapmap];0.85[CHB][hapmap];0.88[JPT][hapmap];0.87[EUR][1000 genomes]
rs9767123	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9767309	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767554	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9767555	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9767652	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9767713	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.86[GIH][hapmap];0.94[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767727	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9800580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9800603	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9800614	0.93[ASW][hapmap];0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9800686	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9800736	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9800806	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9800871	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968911	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv289	chr6:149864898-149998818	Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv5534	chr6:149864898-149998818	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
3	nsv886762	chr6:149866452-150174507	Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	esv1792620	chr6:149909491-150083621	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

mRNA abundance (count:24)

SNP	Gene	Cis/trans	Tissue	Source
rs9689723	PPIL4	cis	cerebellum	SCAN
rs9689723	LRP11	cis	cerebellum	SCAN
rs9689723	PPIL4	cis	parietal	SCAN
rs9689723	RP11-350J20.5	cis	Nerve Tibial	GTEx
rs9689723	RP11-350J20.5	cis	Artery Tibial	GTEx
rs9689723	RP11-350J20.5	cis	Thyroid	GTEx
rs9689723	NUP43	Cis_1M	lymphoblastoid	RTeQTL
rs9689723	RP11-350J20.9	cis	Esophagus Mucosa	GTEx
rs9689723	RP11-350J20.5	cis	Adipose Subcutaneous	GTEx
rs9689723	RP11-350J20.5	cis	Esophagus Mucosa	GTEx
rs9689723	RP11-350J20.5	cis	lung	GTEx
rs9689723	LATS1	cis	parietal	SCAN
rs9689723	RP11-350J20.5	cis	Skin Sun Exposed Lower leg	GTEx
rs9689723	NUP43	cis	Whole Blood	GTEx
rs9689723	RAET1G	cis	Thyroid	GTEx
rs9689723	PCMT1	cis	Esophagus Muscularis	GTEx
rs9689723	LATS1	cis	cerebellum	SCAN
rs9689723	RP11-350J20.5	cis	Esophagus Muscularis	GTEx
rs9689723	FBXO30	cis	cerebellum	SCAN
rs9689723	C6orf72	Cis_1M	lymphoblastoid	RTeQTL
rs9689723	LRP11	cis	parietal	SCAN
rs9689723	GINM1	cis	Whole Blood	GTEx
rs9689723	RP11-350J20.5	cis	Artery Aorta	GTEx
rs9689723	RMND1	cis	cerebellum	SCAN

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149970000-149978400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr6:149970000-149983800	Weak transcription	Gastric	stomach
3	chr6:149970000-149989600	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr6:149970200-149977600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:149970200-149977800	Weak transcription	HMEC	breast
6	chr6:149970200-149978200	Weak transcription	Left Ventricle	heart
7	chr6:149970200-149983000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:149970200-149985800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:149970200-149988200	Weak transcription	Aorta	Aorta
10	chr6:149970200-149989600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr6:149970200-149989600	Weak transcription	Small Intestine	intestine
12	chr6:149970200-149989800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr6:149970400-149977400	Weak transcription	Placenta	Placenta
14	chr6:149970400-149977600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:149970400-149977800	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr6:149970400-149977800	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr6:149970400-149977800	Weak transcription	Primary hematopoietic stem cells	blood
18	chr6:149970400-149977800	Weak transcription	Liver	Liver
19	chr6:149970400-149977800	Weak transcription	Brain Angular Gyrus	brain
20	chr6:149970400-149977800	Weak transcription	Fetal Intestine Large	intestine
21	chr6:149970400-149977800	Weak transcription	Fetal Kidney	kidney
22	chr6:149970400-149977800	Weak transcription	HSMMtube	muscle
23	chr6:149970400-149978000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr6:149970400-149978000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr6:149970400-149978000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr6:149970400-149978000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr6:149970400-149978000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr6:149970400-149978000	Weak transcription	NH-A	brain
29	chr6:149970400-149978200	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr6:149970400-149978200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr6:149970400-149978200	Weak transcription	Cortex derived primary cultured neurospheres	brain
32	chr6:149970400-149978200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr6:149970400-149978200	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr6:149970400-149978200	Weak transcription	Thymus	Thymus
35	chr6:149970400-149978600	Weak transcription	Brain Germinal Matrix	brain
36	chr6:149970400-149981000	Weak transcription	HSMM	muscle
37	chr6:149970400-149981400	Weak transcription	NHEK	skin
38	chr6:149970400-149981400	Weak transcription	Osteobl	bone
39	chr6:149970400-149982200	Weak transcription	NHDF-Ad	bronchial
40	chr6:149970400-149982600	Weak transcription	HUVEC	blood vessel
41	chr6:149970400-149982800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
42	chr6:149970400-149982800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr6:149970400-149982800	Weak transcription	Brain Cingulate Gyrus	brain
44	chr6:149970400-149982800	Weak transcription	NHLF	lung
45	chr6:149970400-149983000	Weak transcription	H1 Cell Line	embryonic stem cell
46	chr6:149970400-149983000	Weak transcription	Muscle Satellite Cultured Cells	--
47	chr6:149970400-149983000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr6:149970400-149983000	Weak transcription	Psoas Muscle	Psoas
49	chr6:149970400-149983000	Weak transcription	A549	lung
50	chr6:149970400-149983800	Weak transcription	H9 Cell Line	embryonic stem cell

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