Variant report

Variant	rs12175504
Chromosome Location	chr6:149985215-149985216
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:149976600..149978666-chr6:149982921..149985539,2	K562	blood:

Extended variants
information (count: 327 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:323)

rs_ID	r²[population]
rs10214845	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10452626	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10457850	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10457851	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10747275	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10747276	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10782310	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10782311	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10782312	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10782313	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10782314	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10782315	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10782316	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10782317	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10782318	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1080670	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10872643	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10872644	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10872645	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10872646	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10872647	0.86[EUR][1000 genomes]
rs10872648	0.86[EUR][1000 genomes]
rs10872649	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10872650	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10872651	0.85[EUR][1000 genomes]
rs10872652	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10872653	0.85[EUR][1000 genomes]
rs10872656	0.82[EUR][1000 genomes]
rs1112729	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1112730	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11155662	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11155668	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11155669	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11155670	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11155671	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11155674	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11155675	0.86[EUR][1000 genomes]
rs11155676	0.83[EUR][1000 genomes]
rs11155677	0.89[EUR][1000 genomes]
rs11155679	0.85[EUR][1000 genomes]
rs11155680	0.83[EUR][1000 genomes]
rs11155681	0.82[EUR][1000 genomes]
rs11155682	0.83[EUR][1000 genomes]
rs11155683	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11155685	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11155689	0.83[EUR][1000 genomes]
rs1125	0.89[EUR][1000 genomes]
rs11968921	0.80[EUR][1000 genomes]
rs12111376	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12174349	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12174716	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12175575	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12178310	0.89[EUR][1000 genomes]
rs12179031	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12182220	0.83[EUR][1000 genomes]
rs12183664	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12191643	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12193364	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12195866	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12200670	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12201033	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12203703	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12205092	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12206402	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12211511	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12213779	0.88[EUR][1000 genomes]
rs12234128	0.83[EUR][1000 genomes]
rs12523793	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12525871	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12526675	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12528279	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12529698	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12660304	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12662162	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12662174	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13215691	0.83[EUR][1000 genomes]
rs1413654	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1413655	0.82[EUR][1000 genomes]
rs17672976	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17673294	0.82[EUR][1000 genomes]
rs17745062	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1889473	0.82[EUR][1000 genomes]
rs1934534	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1984111	0.82[EUR][1000 genomes]
rs2064520	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2064521	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2065663	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2065664	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2095375	0.83[EUR][1000 genomes]
rs2144207	0.85[EUR][1000 genomes]
rs2151909	0.80[EUR][1000 genomes]
rs2151912	0.82[EUR][1000 genomes]
rs2151913	0.83[EUR][1000 genomes]
rs2184369	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2185352	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2275046	0.82[EUR][1000 genomes]
rs2297928	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2297930	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2297932	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2342857	0.83[EUR][1000 genomes]
rs2342858	0.83[EUR][1000 genomes]
rs2342860	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2342861	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34157004	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34337297	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35031906	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35443312	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35763894	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35830138	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35961297	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35967444	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3734295	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3763161	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3763162	0.83[EUR][1000 genomes]
rs3763163	0.83[EUR][1000 genomes]
rs3777949	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3798761	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3805748	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3805749	0.83[EUR][1000 genomes]
rs3805750	0.83[EUR][1000 genomes]
rs3805751	0.83[EUR][1000 genomes]
rs3805753	0.83[EUR][1000 genomes]
rs3828700	0.83[EUR][1000 genomes]
rs3924871	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4039600	0.93[EUR][1000 genomes]
rs4354168	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4380763	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4421206	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4455682	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4552	0.83[EUR][1000 genomes]
rs4642491	0.87[EUR][1000 genomes]
rs4816	0.83[EUR][1000 genomes]
rs4869730	0.83[EUR][1000 genomes]
rs4869731	0.83[EUR][1000 genomes]
rs4869812	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4869923	0.84[EUR][1000 genomes]
rs4869966	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4870015	0.82[EUR][1000 genomes]
rs4870019	0.82[EUR][1000 genomes]
rs4870020	0.81[EUR][1000 genomes]
rs4870048	0.81[EUR][1000 genomes]
rs4870050	0.80[EUR][1000 genomes]
rs4870139	0.87[EUR][1000 genomes]
rs4870144	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4870267	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4870388	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4870493	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4870509	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4870529	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55763431	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55849538	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55938765	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55993747	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56091542	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56374774	0.87[EUR][1000 genomes]
rs56397000	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57938011	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58189451	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60424881	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62439811	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62439836	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62439837	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62439840	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62439842	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62439843	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62441279	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62441284	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62441303	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62441335	0.83[EUR][1000 genomes]
rs6420132	0.82[EUR][1000 genomes]
rs66516768	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6899661	0.83[EUR][1000 genomes]
rs6903998	0.82[EUR][1000 genomes]
rs6913486	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6914319	0.83[EUR][1000 genomes]
rs6936395	0.83[EUR][1000 genomes]
rs7381555	0.82[EUR][1000 genomes]
rs7450246	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7740278	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7744015	0.87[EUR][1000 genomes]
rs7745915	0.82[EUR][1000 genomes]
rs7752594	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7753812	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7754399	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7764846	0.81[EUR][1000 genomes]
rs7767622	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7818	0.82[EUR][1000 genomes]
rs9027	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9285521	0.83[EUR][1000 genomes]
rs9285522	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9285523	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9285524	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9285525	0.82[EUR][1000 genomes]
rs9286597	0.85[EUR][1000 genomes]
rs9322188	0.89[ASN][1000 genomes]
rs9322189	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9322192	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322193	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322194	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9322196	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322197	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322198	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322199	0.89[ASN][1000 genomes]
rs9322200	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322204	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9322206	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322207	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9322208	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9322209	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322210	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9322214	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9322215	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9322217	0.82[EUR][1000 genomes]
rs9322218	0.86[EUR][1000 genomes]
rs9322219	0.87[EUR][1000 genomes]
rs9322220	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9322221	0.84[EUR][1000 genomes]
rs9322223	0.82[EUR][1000 genomes]
rs9322224	0.81[EUR][1000 genomes]
rs933055	0.83[EUR][1000 genomes]
rs9372044	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9377228	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9377229	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9377230	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9379314	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9379348	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9383546	0.82[EUR][1000 genomes]
rs9383812	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9383844	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9393132	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9393175	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9397022	0.83[EUR][1000 genomes]
rs9397357	0.83[EUR][1000 genomes]
rs9399692	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9399693	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9404047	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9404048	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9406286	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9406345	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9406346	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9478291	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9478848	0.82[EUR][1000 genomes]
rs9479094	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9479494	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9479808	0.83[EUR][1000 genomes]
rs9479810	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9480009	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9480031	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9485405	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9485408	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9498382	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9498384	0.86[EUR][1000 genomes]
rs9505823	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9505824	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9505826	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9505967	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9505972	0.85[EUR][1000 genomes]
rs9505974	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9505975	0.83[EUR][1000 genomes]
rs9505982	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9505983	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs952165	0.82[EUR][1000 genomes]
rs952166	0.82[EUR][1000 genomes]
rs9688350	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9688412	0.82[EUR][1000 genomes]
rs9688452	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9688517	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9688699	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9688750	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9688794	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9688803	0.81[EUR][1000 genomes]
rs9688809	0.82[EUR][1000 genomes]
rs9688858	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9688861	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9688867	0.87[EUR][1000 genomes]
rs9688897	0.81[EUR][1000 genomes]
rs9688902	0.81[EUR][1000 genomes]
rs9688938	0.82[EUR][1000 genomes]
rs9688940	0.82[EUR][1000 genomes]
rs9689025	0.82[EUR][1000 genomes]
rs9689036	0.86[EUR][1000 genomes]
rs9689084	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9689242	0.82[EUR][1000 genomes]
rs9689269	0.83[EUR][1000 genomes]
rs9689340	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9689447	0.84[EUR][1000 genomes]
rs9689599	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9689694	0.86[EUR][1000 genomes]
rs9689702	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9689716	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9689723	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9717327	0.85[EUR][1000 genomes]
rs9718079	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9765861	0.84[EUR][1000 genomes]
rs9765929	0.88[EUR][1000 genomes]
rs9765965	0.88[EUR][1000 genomes]
rs9766004	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9766037	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9766214	0.88[EUR][1000 genomes]
rs9766444	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9766525	0.85[EUR][1000 genomes]
rs9766562	0.81[EUR][1000 genomes]
rs9766886	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767077	0.81[EUR][1000 genomes]
rs9767105	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9767113	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9767122	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9767123	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9767192	0.82[EUR][1000 genomes]
rs9767309	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9767554	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767555	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9767652	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9767713	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9767727	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9800580	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9800603	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9800614	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9800686	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9800736	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9800806	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9800871	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9968911	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv289	chr6:149864898-149998818	Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv5534	chr6:149864898-149998818	Active TSS Flanking Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
3	nsv886762	chr6:149866452-150174507	Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
4	esv1792620	chr6:149909491-150083621	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs12175504	NUP43	Cis_1M	lymphoblastoid	RTeQTL
rs12175504	C6orf72	Cis_1M	lymphoblastoid	RTeQTL
rs12175504	RP11-350J20.5	cis	Esophagus Mucosa	GTEx
rs12175504	RP11-350J20.5	cis	lung	GTEx
rs12175504	RP11-350J20.5	cis	Esophagus Muscularis	GTEx
rs12175504	RP11-350J20.5	cis	Thyroid	GTEx
rs12175504	RP11-350J20.5	cis	Stomach	GTEx
rs12175504	RP11-350J20.5	cis	Adipose Subcutaneous	GTEx
rs12175504	RP11-350J20.5	cis	Nerve Tibial	GTEx
rs12175504	RP11-350J20.5	cis	Skin Sun Exposed Lower leg	GTEx
rs12175504	RP11-350J20.5	cis	Artery Tibial	GTEx
rs12175504	GINM1	cis	Whole Blood	GTEx
rs12175504	RP11-350J20.5	cis	Artery Aorta	GTEx
rs12175504	NUP43	cis	Whole Blood	GTEx

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149970000-149989600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:149970200-149985800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:149970200-149988200	Weak transcription	Aorta	Aorta
4	chr6:149970200-149989600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:149970200-149989600	Weak transcription	Small Intestine	intestine
6	chr6:149970200-149989800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr6:149970400-149985600	Weak transcription	Colonic Mucosa	Colon
8	chr6:149970400-149986600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr6:149970400-149986600	Weak transcription	Hela-S3	cervix
10	chr6:149970400-149987600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr6:149970400-149989600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr6:149970400-149989600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr6:149970400-149992800	Weak transcription	Fetal Heart	heart
14	chr6:149970400-149996400	Weak transcription	Fetal Brain Male	brain
15	chr6:149970600-149986000	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr6:149970600-149986000	Weak transcription	Skeletal Muscle Male	skeletal muscle
17	chr6:149970600-149986200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr6:149970600-149989600	Weak transcription	Esophagus	oesophagus
19	chr6:149970600-149989600	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr6:149970800-149992400	Weak transcription	Right Ventricle	heart
21	chr6:149972200-149986000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr6:149977200-150022600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr6:149977400-150001600	Strong transcription	Placenta	Placenta
24	chr6:149977800-150001800	Strong transcription	HUES64 Cell Line	embryonic stem cell
25	chr6:149977800-150005800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr6:149977800-150020600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr6:149978000-150029200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr6:149978600-149989400	Weak transcription	Colon Smooth Muscle	Colon
29	chr6:149978800-149989000	Weak transcription	HSMMtube	muscle
30	chr6:149978800-149989200	Weak transcription	Brain Substantia Nigra	brain
31	chr6:149979000-149985600	Weak transcription	Thymus	Thymus
32	chr6:149979400-149995800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
33	chr6:149980000-149987000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:149980000-150003400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr6:149980000-150008000	Strong transcription	Monocytes-CD14+_RO01746	blood
36	chr6:149980200-149987000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr6:149980200-149987600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr6:149980200-149998600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
39	chr6:149980400-149986800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr6:149980400-149987200	Strong transcription	Liver	Liver
41	chr6:149980400-149995800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
42	chr6:149980400-149997200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
43	chr6:149980400-149998600	Strong transcription	Duodenum Mucosa	Duodenum
44	chr6:149980400-150001600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
45	chr6:149980600-149987000	Strong transcription	Primary T helper cells PMA-I stimulated	--
46	chr6:149980600-150024800	Strong transcription	Fetal Thymus	thymus
47	chr6:149980800-149986800	Strong transcription	Duodenum Smooth Muscle	Duodenum
48	chr6:149980800-149987000	Strong transcription	Primary hematopoietic stem cells	blood
49	chr6:149980800-149987000	Strong transcription	K562	blood
50	chr6:149980800-149987200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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