Variant report

Variant	rs2297928
Chromosome Location	chr6:150039720-150039721
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA1	chr6:150038617-150040028	PBDE	blood:	n/a	chr6:150039753-150039760 chr6:150039692-150039709 chr6:150039753-150039762 chr6:150039701-150039711 chr6:150039701-150039710 chr6:150039703-150039713 chr6:150039753-150039760 chr6:150039703-150039710 chr6:150039703-150039710 chr6:150039752-150039762 chr6:150039754-150039771 chr6:150039746-150039767 chr6:150039753-150039760 chr6:150038726-150038734 chr6:150039701-150039710 chr6:150039703-150039710
2	MAX	chr6:150038583-150039915	SK-N-SH	brain:	n/a	chr6:150038907-150038916
3	HCFC1	chr6:150038185-150040121	Hela-S3	cervix:	n/a	n/a
4	GABPA	chr6:150038511-150039840	HL-60	blood:	n/a	n/a
5	MAZ	chr6:150038608-150039912	K562	blood:	n/a	chr6:150038907-150038916
6	CEBPD	chr6:150038875-150040063	K562	blood:	n/a	n/a
7	HEY1	chr6:150038517-150040004	K562	blood:	n/a	chr6:150038920-150038935
8	POLR2A	chr6:150038549-150039919	ECC-1	luminal epithelium:	n/a	n/a
9	POLR2A	chr6:150038543-150040092	GM12878	blood:	n/a	n/a
10	GATA3	chr6:150039608-150039937	MCF-7	breast:	n/a	chr6:150039752-150039760 chr6:150039753-150039760 chr6:150039692-150039709 chr6:150039753-150039762 chr6:150039701-150039711 chr6:150039702-150039710 chr6:150039701-150039710 chr6:150039703-150039713 chr6:150039753-150039760 chr6:150039703-150039710 chr6:150039703-150039710 chr6:150039752-150039762 chr6:150039754-150039771 chr6:150039746-150039767 chr6:150039753-150039760 chr6:150039701-150039710 chr6:150039703-150039710
11	RELA	chr6:150038735-150039848	GM19193	blood:	n/a	n/a
12	SMARCC1	chr6:150038327-150039763	Hela-S3	cervix:	n/a	n/a
13	ELK4	chr6:150038717-150039886	Hela-S3	cervix:	n/a	n/a
14	STAT5A	chr6:150038495-150039940	GM12878	blood:	n/a	n/a
15	POLR2A	chr6:150038615-150039984	K562	blood:	n/a	n/a
16	JUN	chr6:150039032-150039962	K562	blood:	n/a	n/a
17	TAF1	chr6:150038451-150039911	ECC-1	luminal epithelium:	n/a	n/a
18	TBP	chr6:150038229-150039962	Hela-S3	cervix:	n/a	n/a
19	ESR1	chr6:150039623-150039981	T-47D	breast:	n/a	n/a
20	UBTF	chr6:150038391-150039738	K562	blood:	n/a	n/a
21	NR2F2	chr6:150038460-150040087	K562	blood:	n/a	n/a
22	CUX1	chr6:150039227-150040072	K562	blood:	n/a	chr6:150039726-150039742
23	POLR2A	chr6:150038354-150039825	IMR90	lung:	n/a	n/a
24	MAX	chr6:150038598-150039911	NB4	blood:	n/a	chr6:150038907-150038916
25	POLR2A	chr6:150038497-150040000	H1-neurons	neurons:	n/a	n/a
26	MAX	chr6:150038283-150040103	K562	blood:	n/a	chr6:150038907-150038916
27	ELK1	chr6:150039121-150039869	K562	blood:	n/a	n/a
28	REST	chr6:150038514-150039883	K562	blood:	n/a	n/a
29	EP300	chr6:150038924-150039737	GM12878	blood:	n/a	n/a
30	YY1	chr6:150038458-150039798	SK-N-SH	brain:	n/a	chr6:150039404-150039415 chr6:150038774-150038788
31	ESR1	chr6:150039548-150039902	T-47D	breast:	n/a	n/a
32	GATA3	chr6:150038464-150040082	MCF-7	breast:	n/a	chr6:150039752-150039760 chr6:150039753-150039760 chr6:150039692-150039709 chr6:150039753-150039762 chr6:150039701-150039711 chr6:150039702-150039710 chr6:150039701-150039710 chr6:150039703-150039713 chr6:150039753-150039760 chr6:150039703-150039710 chr6:150039703-150039710 chr6:150039752-150039762 chr6:150039754-150039771 chr6:150039746-150039767 chr6:150039753-150039760 chr6:150038726-150038734 chr6:150039701-150039710 chr6:150039703-150039710
33	ZNF143	chr6:150038712-150039779	Hela-S3	cervix:	n/a	n/a
34	PML	chr6:150038817-150040128	K562	blood:	n/a	n/a
35	POLR2A	chr6:150038837-150039817	HCT-116	colon:	n/a	n/a
36	TEAD4	chr6:150038427-150040025	K562	blood:	n/a	n/a
37	ZNF384	chr6:150038756-150039757	K562	blood:	n/a	n/a
38	ZNF263	chr6:150038297-150039824	HEK293-T-REx	kidney:	n/a	n/a
39	POLR2A	chr6:150038673-150039920	K562	blood:	n/a	n/a
40	POLR2A	chr6:150038397-150040016	PFSK-1	brain:	n/a	n/a
41	POLR2A	chr6:150038440-150039996	PFSK-1	brain:	n/a	n/a
42	POLR2A	chr6:150038734-150039887	GM12878	blood:	n/a	n/a
43	MAX	chr6:150038431-150039934	HepG2	liver:	n/a	chr6:150038907-150038916
44	CEBPD	chr6:150038599-150040078	K562	blood:	n/a	n/a
45	POLR2A	chr6:150036887-150041282	K562	blood:	n/a	n/a
46	POLR2A	chr6:150038521-150040034	MCF-7	breast:	n/a	n/a
47	GATA2	chr6:150039488-150039876	K562	blood:	n/a	chr6:150039753-150039760 chr6:150039692-150039709 chr6:150039753-150039762 chr6:150039701-150039711 chr6:150039701-150039710 chr6:150039703-150039713 chr6:150039753-150039760 chr6:150039703-150039710 chr6:150039748-150039762 chr6:150039703-150039710 chr6:150039752-150039762 chr6:150039754-150039771 chr6:150039746-150039767 chr6:150039753-150039760 chr6:150039701-150039710 chr6:150039703-150039710
48	UBTF	chr6:150038327-150039971	K562	blood:	n/a	n/a
49	GATA3	chr6:150039547-150039891	T-47D	breast:	n/a	chr6:150039752-150039760 chr6:150039753-150039760 chr6:150039692-150039709 chr6:150039753-150039762 chr6:150039701-150039711 chr6:150039702-150039710 chr6:150039701-150039710 chr6:150039703-150039713 chr6:150039753-150039760 chr6:150039703-150039710 chr6:150039703-150039710 chr6:150039752-150039762 chr6:150039754-150039771 chr6:150039746-150039767 chr6:150039753-150039760 chr6:150039701-150039710 chr6:150039703-150039710
50	SRF	chr6:150039687-150039854	GM12878	blood:	n/a	chr6:150039790-150039804 chr6:150039792-150039805 chr6:150039788-150039806

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:150039699-150039749	HCF	heart:	n/a
2	chr6:150039699-150039749	PFSK-1	brain:	n/a
3	chr6:150039699-150039749	HRCEpiC	kidney:	n/a
4	chr6:150039699-150039749	HRE	kidney:	n/a
5	chr6:150039699-150039749	K562	blood:	n/a
6	chr6:150039699-150039749	Hela-S3	cervix:	n/a
7	chr6:150039699-150039749	GM19239	blood:	n/a
8	chr6:150039699-150039749	IMR90	lung:	fetal
9	chr6:150039699-150039749	NT2-D1	testis:	n/a
10	chr6:150039699-150039749	ovcar-3	ovarian:	n/a
11	chr6:150039699-150039749	Jurkat	blood:	n/a
12	chr6:150039699-150039749	AG09309	skin:	n/a
13	chr6:150039699-150039749	NHBE	bronchial:	n/a
14	chr6:150039699-150039749	GM12891	blood:	n/a
15	chr6:150039699-150039749	HUVEC	blood vessel:	n/a
16	chr6:150039699-150039749	SKMC	muscle:	n/a
17	chr6:150039699-150039749	CMK	blood:	n/a
18	chr6:150039699-150039749	BE2_C	brain:	n/a
19	chr6:150039699-150039749	A549	lung:	n/a
20	chr6:150039699-150039749	SAEC	small airway:	n/a
21	chr6:150039699-150039749	LNCaP	prostate:	n/a
22	chr6:150039699-150039749	GM12878	blood:	n/a
23	chr6:150039699-150039749	HMEC	breast:	n/a
24	chr6:150039699-150039749	HRPEpiC	eye:	n/a
25	chr6:150039699-150039749	NB4	blood:	n/a
26	chr6:150039699-150039749	HCPEpiC	choroid plexus:	n/a
27	chr6:150039699-150039749	PANC-1	pancreas:	n/a
28	chr6:150039699-150039749	AG04450	lung:	fetal
29	chr6:150039699-150039749	BJ	skin:	n/a
30	chr6:150039699-150039749	T-47D	breast:	n/a
31	chr6:150039699-150039749	H1-hESC	embryonic stem cell:	embryo
32	chr6:150039699-150039749	Caco-2	colon:	n/a
33	chr6:150039699-150039749	NH-A	brain:	n/a
34	chr6:150039699-150039749	HPAEpiC	pulmonary alveolar:	n/a
35	chr6:150039699-150039749	HEK293	kidney:	embryo
36	chr6:150039699-150039749	HIPEpiC	eye:	n/a
37	chr6:150039699-150039749	AG09319	gingival:	n/a
38	chr6:150039699-150039749	RPTEC	kidney:	n/a
39	chr6:150039699-150039749	ECC-1	luminal epithelium:	n/a
40	chr6:150039699-150039749	HepG2	liver:	n/a
41	chr6:150039699-150039749	HL-60	blood:	n/a
42	chr6:150039699-150039749	AG10803	skin:	n/a
43	chr6:150039699-150039749	HAEpiC	amniotic membrane:	n/a
44	chr6:150039699-150039749	MCF-7	breast:	n/a
45	chr6:150039699-150039749	MCF10A-Er-Src	breast:	n/a
46	chr6:150039699-150039749	AG04449	skin:	fetal
47	chr6:150039699-150039749	HNPCEpiC	eye:	n/a
48	chr6:150039699-150039749	NHDF-neo	bronchial:	n/a
49	chr6:150039699-150039749	GM06990	blood:	n/a
50	chr6:150039699-150039749	HCM	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:150038868..150039820-chr6:150070353..150070958,2	MCF-7	breast:
2	chr6:149886717..149888905-chr6:150037583..150040474,2	MCF-7	breast:
3	chr6:149864465..149868641-chr6:150037478..150040253,6	MCF-7	breast:
4	chr6:149866797..149869221-chr6:150037385..150040762,4	K562	blood:
5	chr6:150039273..150039805-chr6:150070885..150071783,2	MCF-7	breast:
6	chr6:150039646..150042123-chr6:150090131..150092375,2	K562	blood:
7	chr6:149969487..149971965-chr6:150038903..150040820,3	K562	blood:
8	chr6:111195402..111196360-chr6:150039114..150039744,2	Hela-S3	cervix:
9	chr6:150037573..150039874-chr7:99755624..99757771,2	MCF-7	breast:
10	chr6:149967309..149971944-chr6:150037502..150040952,6	MCF-7	breast:
11	chr5:172197749..172198455-chr6:150038887..150039868,2	Hela-S3	cervix:
12	chr6:150036817..150045008-chr6:150066563..150073628,17	MCF-7	breast:
13	chr6:150037658..150040820-chr6:150066171..150069234,4	MCF-7	breast:
14	chr6:150022443..150028756-chr6:150036776..150040441,8	MCF-7	breast:
15	chr6:149887426..149891060-chr6:150037726..150040656,4	K562	blood:
16	chr6:149884840..149889202-chr6:150038504..150040931,4	K562	blood:
17	chr6:149967293..149971613-chr6:150037790..150041524,8	K562	blood:
18	chr6:149352728..149354619-chr6:150038400..150040013,2	MCF-7	breast:
19	chr6:150037915..150040218-chr6:150069685..150072655,4	MCF-7	breast:
20	chr6:150038744..150042586-chr6:150067819..150072874,7	K562	blood:

Variant related genes	Relation type
LATS1	TF binding region
LATS1	CpG island
ENSG00000120265	Chromatin interaction
ENSG00000120253	Chromatin interaction
ENSG00000055211	Chromatin interaction
ENSG00000131023	Chromatin interaction
ENSG00000123505	Chromatin interaction
ENSG00000120129	Chromatin interaction
ENSG00000236591	Chromatin interaction
ENSG00000131013	Chromatin interaction
ENSG00000186625	Chromatin interaction
ENSG00000146826	Chromatin interaction

Extended variants
information (count: 347 )
Associated
traits (count: 16 )

rSNPs within LD-proxies of this variant (count:342)

rs_ID	r²[population]
rs10214845	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10452626	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10457850	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10457851	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10747275	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10747276	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10782310	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782311	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782312	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782313	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10782314	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782315	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782316	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782317	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782318	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1080670	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10872643	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10872644	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10872645	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10872646	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10872647	0.93[EUR][1000 genomes]
rs10872648	0.93[EUR][1000 genomes]
rs10872649	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10872650	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10872651	0.92[EUR][1000 genomes]
rs10872652	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10872653	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10872656	0.82[EUR][1000 genomes]
rs1112729	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1112730	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155662	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11155668	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11155669	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11155670	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155671	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155672	0.81[EUR][1000 genomes]
rs11155674	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11155675	0.93[EUR][1000 genomes]
rs11155676	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11155677	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11155679	0.93[EUR][1000 genomes]
rs11155680	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11155681	0.83[EUR][1000 genomes]
rs11155682	0.84[EUR][1000 genomes]
rs11155683	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155685	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155689	0.83[EUR][1000 genomes]
rs1125	0.94[EUR][1000 genomes]
rs11968921	0.81[EUR][1000 genomes]
rs12111376	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12174349	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12174716	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12175504	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12175575	0.89[EUR][1000 genomes]
rs12176034	0.81[EUR][1000 genomes]
rs12178310	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12179031	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12182220	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12183664	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12191643	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12193364	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12195866	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12200670	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12201033	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12203703	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12205092	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12206402	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12210605	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12211511	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12213779	0.89[EUR][1000 genomes]
rs12234128	0.88[EUR][1000 genomes]
rs12523793	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12525871	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12526675	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12528279	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12529698	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12660304	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12662162	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12662174	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13215691	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1413654	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1413655	0.82[EUR][1000 genomes]
rs17672976	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17673294	0.83[EUR][1000 genomes]
rs17745062	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1889473	0.82[EUR][1000 genomes]
rs1934534	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1984111	0.82[EUR][1000 genomes]
rs2064520	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2064521	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2065663	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2065664	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2095375	0.83[EUR][1000 genomes]
rs2144207	0.83[EUR][1000 genomes]
rs2151909	0.83[EUR][1000 genomes]
rs2151912	0.82[EUR][1000 genomes]
rs2151913	0.83[EUR][1000 genomes]
rs2184369	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2184370	0.87[EUR][1000 genomes]
rs2185352	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2275045	0.87[EUR][1000 genomes]
rs2275046	0.82[EUR][1000 genomes]
rs2297930	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2297932	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2342764	0.87[EUR][1000 genomes]
rs2342857	0.83[EUR][1000 genomes]
rs2342858	0.83[EUR][1000 genomes]
rs2342860	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2342861	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2880435	0.81[EUR][1000 genomes]
rs34157004	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34337297	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35031906	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35443312	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35763894	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35830138	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35961297	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35967444	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3734295	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3763161	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3763162	0.83[EUR][1000 genomes]
rs3763163	0.83[EUR][1000 genomes]
rs3777949	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3798761	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3805748	0.88[EUR][1000 genomes]
rs3805749	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3805750	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3805751	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3805752	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3805753	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3828700	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3924871	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4039600	0.91[EUR][1000 genomes]
rs4242279	0.87[EUR][1000 genomes]
rs4354168	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4380763	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4421206	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4455682	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4552	0.83[EUR][1000 genomes]
rs4642491	0.88[EUR][1000 genomes]
rs4816	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4869730	0.83[EUR][1000 genomes]
rs4869731	0.83[EUR][1000 genomes]
rs4869812	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4869923	0.82[EUR][1000 genomes]
rs4869966	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4870015	0.82[EUR][1000 genomes]
rs4870019	0.83[EUR][1000 genomes]
rs4870020	0.83[EUR][1000 genomes]
rs4870048	0.82[EUR][1000 genomes]
rs4870049	0.87[EUR][1000 genomes]
rs4870050	0.87[EUR][1000 genomes]
rs4870052	0.87[EUR][1000 genomes]
rs4870139	0.91[EUR][1000 genomes]
rs4870144	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4870267	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4870388	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4870493	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4870509	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4870529	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55763431	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55849538	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55938765	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55993747	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56091542	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56103941	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56374774	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56397000	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57938011	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58189451	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60424881	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62439811	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62439836	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62439837	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62439840	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62439842	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62439843	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62441279	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62441284	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62441303	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62441335	0.83[EUR][1000 genomes]
rs6420132	0.82[EUR][1000 genomes]
rs66516768	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6899661	0.83[EUR][1000 genomes]
rs6903998	0.82[EUR][1000 genomes]
rs6913486	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6914319	0.83[EUR][1000 genomes]
rs6936395	0.83[EUR][1000 genomes]
rs7381555	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7450246	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7740278	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7740784	0.87[EUR][1000 genomes]
rs7744015	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7745915	0.82[EUR][1000 genomes]
rs7752089	0.87[EUR][1000 genomes]
rs7752594	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7753812	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7754399	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7764846	0.83[EUR][1000 genomes]
rs7767622	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7818	0.83[EUR][1000 genomes]
rs9027	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9285521	0.88[EUR][1000 genomes]
rs9285522	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9285523	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9285524	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9285525	0.82[EUR][1000 genomes]
rs9286597	0.83[EUR][1000 genomes]
rs9322188	0.85[ASN][1000 genomes]
rs9322189	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9322190	0.82[EUR][1000 genomes]
rs9322192	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322193	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322194	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9322196	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9322197	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9322198	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9322199	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9322200	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9322204	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9322206	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9322207	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9322208	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9322209	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9322210	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322214	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9322215	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322217	0.89[EUR][1000 genomes]
rs9322218	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322219	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322220	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322221	0.89[EUR][1000 genomes]
rs9322223	0.82[EUR][1000 genomes]
rs9322224	0.82[EUR][1000 genomes]
rs933055	0.83[EUR][1000 genomes]
rs9371199	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9371201	0.81[EUR][1000 genomes]
rs9371486	0.82[EUR][1000 genomes]
rs9372044	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9377228	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9377229	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9377230	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9379314	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9379348	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9383546	0.82[EUR][1000 genomes]
rs9383812	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9383844	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9393132	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9393175	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9397022	0.83[EUR][1000 genomes]
rs9397357	0.83[EUR][1000 genomes]
rs9399692	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9399693	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9404047	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9404048	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9406286	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9406345	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9406346	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9478291	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9478848	0.82[EUR][1000 genomes]
rs9479094	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9479494	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9479808	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9479810	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9480009	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9480031	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9485405	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9485408	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9498382	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9498384	0.91[EUR][1000 genomes]
rs9505823	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9505824	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9505826	0.91[EUR][1000 genomes]
rs9505967	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9505972	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9505974	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9505975	0.84[EUR][1000 genomes]
rs9505982	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9505983	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs952165	0.82[EUR][1000 genomes]
rs952166	0.82[EUR][1000 genomes]
rs958953	0.81[EUR][1000 genomes]
rs9688350	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9688412	0.82[EUR][1000 genomes]
rs9688452	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9688517	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9688699	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9688750	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9688794	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9688803	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688809	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688858	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9688861	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9688867	0.88[EUR][1000 genomes]
rs9688897	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688902	0.86[EUR][1000 genomes]
rs9688938	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688940	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689025	0.84[EUR][1000 genomes]
rs9689036	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9689084	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9689242	0.87[EUR][1000 genomes]
rs9689269	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689340	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9689447	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689599	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9689694	0.87[EUR][1000 genomes]
rs9689702	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9689716	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9689723	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9717327	0.90[EUR][1000 genomes]
rs9718079	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9765861	0.84[EUR][1000 genomes]
rs9765929	0.89[EUR][1000 genomes]
rs9765965	0.88[EUR][1000 genomes]
rs9766004	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9766037	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9766214	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9766444	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9766525	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9766562	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9766886	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9767077	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9767105	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767113	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9767122	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9767123	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767192	0.82[EUR][1000 genomes]
rs9767309	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9767554	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9767555	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767652	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9767713	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9767727	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9800580	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9800603	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9800614	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9800686	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9800736	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9800806	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9800871	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9968911	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886762	chr6:149866452-150174507	Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	esv1792620	chr6:149909491-150083621	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	esv3475167	chr6:150003006-150086225	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	esv3475168	chr6:150003006-150086225	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
5	esv1803291	chr6:150018508-150164190	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:16)

SNP	Gene	Cis/trans	Tissue	Source
rs2297928	RP11-350J20.5	cis	Esophagus Muscularis	GTEx
rs2297928	RP11-350J20.5	cis	Artery Tibial	GTEx
rs2297928	GINM1	cis	Whole Blood	GTEx
rs2297928	C6orf72	Cis_1M	lymphoblastoid	RTeQTL
rs2297928	RP11-350J20.5	cis	Skin Sun Exposed Lower leg	GTEx
rs2297928	RP11-350J20.5	cis	Artery Aorta	GTEx
rs2297928	PCMT1	cis	Esophagus Muscularis	GTEx
rs2297928	NUP43	Cis_1M	lymphoblastoid	RTeQTL
rs2297928	RP11-350J20.9	cis	Esophagus Mucosa	GTEx
rs2297928	RP11-350J20.5	cis	lung	GTEx
rs2297928	RP11-350J20.5	cis	Thyroid	GTEx
rs2297928	NUP43	cis	Whole Blood	GTEx
rs2297928	RP11-350J20.5	cis	Adipose Subcutaneous	GTEx
rs2297928	RP11-350J20.5	cis	Esophagus Mucosa	GTEx
rs2297928	RAET1G	cis	Thyroid	GTEx
rs2297928	RP11-350J20.5	cis	Nerve Tibial	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150035400-150040000	Active TSS	GM12878-XiMat	blood
2	chr6:150036800-150040200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:150037000-150039800	Active TSS	NHDF-Ad	bronchial
4	chr6:150037200-150040000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr6:150037200-150040200	Flanking Active TSS	Primary B cells from cord blood	blood
6	chr6:150037200-150040200	Active TSS	Colonic Mucosa	Colon
7	chr6:150037400-150040000	Active TSS	Esophagus	oesophagus
8	chr6:150037400-150040000	Active TSS	Fetal Intestine Large	intestine
9	chr6:150037400-150040000	Active TSS	Psoas Muscle	Psoas
10	chr6:150037400-150040000	Active TSS	Stomach Mucosa	stomach
11	chr6:150037400-150040000	Active TSS	NHLF	lung
12	chr6:150037600-150039800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr6:150037600-150039800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr6:150037600-150039800	Active TSS	Fetal Muscle Leg	muscle
15	chr6:150037600-150039800	Active TSS	Stomach Smooth Muscle	stomach
16	chr6:150037600-150039800	Active TSS	NHEK	skin
17	chr6:150037600-150040000	Active TSS	HUES6 Cell Line	embryonic stem cell
18	chr6:150037600-150040000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr6:150037600-150040000	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
20	chr6:150037600-150040000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr6:150037600-150040000	Active TSS	Left Ventricle	heart
22	chr6:150037600-150040000	Active TSS	Right Ventricle	heart
23	chr6:150037600-150040000	Active TSS	A549	lung
24	chr6:150037600-150040000	Active TSS	HSMM	muscle
25	chr6:150037600-150040200	Active TSS	Brain Germinal Matrix	brain
26	chr6:150037600-150040200	Active TSS	Fetal Brain Female	brain
27	chr6:150037600-150040200	Active TSS	Hela-S3	cervix
28	chr6:150037600-150040200	Active TSS	HMEC	breast
29	chr6:150037800-150039800	Active TSS	ES-I3 Cell Line	embryonic stem cell
30	chr6:150037800-150039800	Active TSS	Fetal Stomach	stomach
31	chr6:150037800-150040000	Active TSS	HUES64 Cell Line	embryonic stem cell
32	chr6:150037800-150040000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr6:150037800-150040000	Active TSS	Aorta	Aorta
34	chr6:150037800-150040000	Active TSS	Lung	lung
35	chr6:150037800-150040000	Active TSS	Ovary	ovary
36	chr6:150038000-150039800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr6:150038000-150039800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr6:150038000-150039800	Active TSS	Breast Myoepithelial Primary Cells	Breast
39	chr6:150038000-150039800	Active TSS	Brain Substantia Nigra	brain
40	chr6:150038000-150039800	Active TSS	Colon Smooth Muscle	Colon
41	chr6:150038000-150039800	Active TSS	Fetal Adrenal Gland	Adrenal Gland
42	chr6:150038000-150039800	Active TSS	Fetal Intestine Small	intestine
43	chr6:150038000-150039800	Active TSS	Fetal Lung	lung
44	chr6:150038000-150039800	Bivalent/Poised TSS	HepG2	liver
45	chr6:150038000-150040000	Active TSS	H9 Cell Line	embryonic stem cell
46	chr6:150038000-150040000	Active TSS	iPS-15b Cell Line	embryonic stem cell
47	chr6:150038000-150040000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr6:150038000-150040000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
49	chr6:150038000-150040000	Active TSS	Sigmoid Colon	Sigmoid Colon
50	chr6:150038000-150040000	Active TSS	Small Intestine	intestine

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