Variant report

Variant	rs56103941
Chromosome Location	chr6:150137231-150137232
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150129292..150133807-chr6:150135099..150138649,4	K562	blood:

Variant related genes	Relation type
ENSG00000120265	Chromatin interaction

Extended variants
information (count: 319 )
Associated
traits (count: 16 )

rSNPs within LD-proxies of this variant (count:315)

rs_ID	r²[population]
rs10214845	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10452626	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10457850	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10457851	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10747275	0.81[EUR][1000 genomes]
rs10747276	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10782311	0.81[EUR][1000 genomes]
rs10782312	0.81[EUR][1000 genomes]
rs10782313	0.81[EUR][1000 genomes]
rs10782314	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10782315	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10782316	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10782317	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10782318	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1080670	0.81[EUR][1000 genomes]
rs10872643	0.85[EUR][1000 genomes]
rs10872644	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10872645	0.83[EUR][1000 genomes]
rs10872646	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10872647	0.84[EUR][1000 genomes]
rs10872648	0.84[EUR][1000 genomes]
rs10872649	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10872650	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10872651	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10872652	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10872653	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10872656	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1108889	0.90[EUR][1000 genomes]
rs1112729	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1112730	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11155668	0.81[EUR][1000 genomes]
rs11155669	0.82[EUR][1000 genomes]
rs11155670	0.82[EUR][1000 genomes]
rs11155671	0.84[EUR][1000 genomes]
rs11155674	0.85[EUR][1000 genomes]
rs11155675	0.83[EUR][1000 genomes]
rs11155676	0.83[EUR][1000 genomes]
rs11155677	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11155679	0.84[EUR][1000 genomes]
rs11155680	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11155681	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11155682	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11155683	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11155685	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11155689	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1125	0.81[EUR][1000 genomes]
rs11968921	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12111376	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12174349	0.87[EUR][1000 genomes]
rs12174716	0.84[EUR][1000 genomes]
rs12175575	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12176034	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12178310	0.85[EUR][1000 genomes]
rs12179031	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12182220	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12183664	0.84[EUR][1000 genomes]
rs12191643	0.82[EUR][1000 genomes]
rs12195866	0.82[EUR][1000 genomes]
rs12200670	0.85[EUR][1000 genomes]
rs12201033	0.80[EUR][1000 genomes]
rs12203703	0.87[EUR][1000 genomes]
rs12205092	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12206402	0.83[EUR][1000 genomes]
rs12210605	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12211511	0.84[EUR][1000 genomes]
rs12213779	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12525871	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12526675	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12528279	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12529698	0.84[EUR][1000 genomes]
rs12660304	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12662174	0.82[EUR][1000 genomes]
rs13215691	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1413654	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1413655	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17672976	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17673294	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17745062	0.82[EUR][1000 genomes]
rs1889473	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1934534	0.85[EUR][1000 genomes]
rs1984111	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2064521	0.81[EUR][1000 genomes]
rs2065663	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2065664	0.81[EUR][1000 genomes]
rs2095375	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2151909	0.88[EUR][1000 genomes]
rs2151912	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2151913	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2184369	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2184370	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2185352	0.85[EUR][1000 genomes]
rs2210683	0.86[EUR][1000 genomes]
rs2275045	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2275046	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2297928	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2297930	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2297932	0.87[EUR][1000 genomes]
rs2342764	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2342765	0.86[EUR][1000 genomes]
rs2342857	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2342858	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2342860	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2342861	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2880435	0.93[EUR][1000 genomes]
rs2880436	0.90[EUR][1000 genomes]
rs34157004	0.85[EUR][1000 genomes]
rs34337297	0.81[EUR][1000 genomes]
rs35031906	0.82[EUR][1000 genomes]
rs35443312	0.82[EUR][1000 genomes]
rs35763894	0.83[EUR][1000 genomes]
rs35830138	0.85[EUR][1000 genomes]
rs35961297	0.85[EUR][1000 genomes]
rs35967444	0.85[EUR][1000 genomes]
rs3763161	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3763162	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3763163	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3798761	0.85[EUR][1000 genomes]
rs3805748	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3805749	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3805750	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3805751	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3805752	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3805753	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3828700	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3924871	0.85[EUR][1000 genomes]
rs4242279	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4354168	0.85[EUR][1000 genomes]
rs4380763	0.85[EUR][1000 genomes]
rs4421206	0.85[EUR][1000 genomes]
rs4455682	0.85[EUR][1000 genomes]
rs4552	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4642491	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4816	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4869730	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4869731	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4869750	0.86[EUR][1000 genomes]
rs4869812	0.85[EUR][1000 genomes]
rs4869966	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4870015	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870019	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870020	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870048	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4870049	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870050	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870052	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4870054	0.86[EUR][1000 genomes]
rs4870055	0.85[EUR][1000 genomes]
rs4870267	0.85[EUR][1000 genomes]
rs4870388	0.85[EUR][1000 genomes]
rs4870493	0.85[EUR][1000 genomes]
rs4870509	0.85[EUR][1000 genomes]
rs4870529	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55763431	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55849538	0.83[EUR][1000 genomes]
rs55938765	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55993747	0.81[EUR][1000 genomes]
rs56091542	0.83[EUR][1000 genomes]
rs56374774	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56397000	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57938011	0.83[EUR][1000 genomes]
rs60424881	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62439811	0.83[EUR][1000 genomes]
rs62439836	0.84[EUR][1000 genomes]
rs62439837	0.85[EUR][1000 genomes]
rs62439840	0.85[EUR][1000 genomes]
rs62439842	0.85[EUR][1000 genomes]
rs62439843	0.82[EUR][1000 genomes]
rs62441279	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62441284	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62441303	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62441335	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6420132	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66516768	0.85[EUR][1000 genomes]
rs6899661	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6903998	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6913486	0.85[EUR][1000 genomes]
rs6914319	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6936395	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7450246	0.85[EUR][1000 genomes]
rs7738696	0.89[EUR][1000 genomes]
rs7740278	0.83[EUR][1000 genomes]
rs7740784	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7743823	0.89[EUR][1000 genomes]
rs7744015	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7744105	0.89[EUR][1000 genomes]
rs7745915	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7752089	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7752594	0.85[EUR][1000 genomes]
rs7753812	0.82[EUR][1000 genomes]
rs7754399	0.85[EUR][1000 genomes]
rs7764846	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7767622	0.85[EUR][1000 genomes]
rs7769115	0.89[EUR][1000 genomes]
rs7818	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs868375	0.87[EUR][1000 genomes]
rs880245	0.90[EUR][1000 genomes]
rs880246	0.90[EUR][1000 genomes]
rs9285522	0.83[EUR][1000 genomes]
rs9285523	0.80[EUR][1000 genomes]
rs9285524	0.82[EUR][1000 genomes]
rs9285525	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9322196	0.81[EUR][1000 genomes]
rs9322198	0.81[EUR][1000 genomes]
rs9322200	0.82[EUR][1000 genomes]
rs9322204	0.83[EUR][1000 genomes]
rs9322207	0.85[EUR][1000 genomes]
rs9322208	0.85[EUR][1000 genomes]
rs9322209	0.85[EUR][1000 genomes]
rs9322210	0.85[EUR][1000 genomes]
rs9322214	0.85[EUR][1000 genomes]
rs9322215	0.84[EUR][1000 genomes]
rs9322218	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322219	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322220	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322221	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322223	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322224	0.95[EUR][1000 genomes]
rs933055	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9371199	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9371201	0.94[EUR][1000 genomes]
rs9371207	0.90[EUR][1000 genomes]
rs9371486	0.95[EUR][1000 genomes]
rs9372044	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9377230	0.81[EUR][1000 genomes]
rs9379348	0.81[EUR][1000 genomes]
rs9383546	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9383812	0.85[EUR][1000 genomes]
rs9383843	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9383844	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9383864	0.89[EUR][1000 genomes]
rs9383865	0.89[EUR][1000 genomes]
rs9383874	0.90[EUR][1000 genomes]
rs9393132	0.85[EUR][1000 genomes]
rs9393175	0.85[EUR][1000 genomes]
rs9397022	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9397036	0.89[EUR][1000 genomes]
rs9397357	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9404048	0.81[EUR][1000 genomes]
rs9406286	0.83[EUR][1000 genomes]
rs9406345	0.82[EUR][1000 genomes]
rs9406346	0.81[EUR][1000 genomes]
rs9478291	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9478848	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9479094	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9479494	0.88[EUR][1000 genomes]
rs9479808	0.81[EUR][1000 genomes]
rs9479810	0.86[EUR][1000 genomes]
rs9480009	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9480031	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9485408	0.81[EUR][1000 genomes]
rs9505823	0.82[EUR][1000 genomes]
rs9505824	0.82[EUR][1000 genomes]
rs9505967	0.85[EUR][1000 genomes]
rs9505972	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9505974	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9505975	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9505982	0.81[EUR][1000 genomes]
rs9505983	0.82[EUR][1000 genomes]
rs952165	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs952166	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs958953	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9688350	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9688412	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9688452	0.85[EUR][1000 genomes]
rs9688517	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9688699	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9688750	0.82[EUR][1000 genomes]
rs9688794	0.82[EUR][1000 genomes]
rs9688803	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9688809	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9688861	0.83[EUR][1000 genomes]
rs9688867	0.90[EUR][1000 genomes]
rs9688897	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9688902	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9688938	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9688940	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9689025	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689036	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9689084	0.83[EUR][1000 genomes]
rs9689242	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9689269	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9689340	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9689447	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9689599	0.82[EUR][1000 genomes]
rs9689694	0.89[EUR][1000 genomes]
rs9689702	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9689716	0.84[EUR][1000 genomes]
rs9689723	0.84[EUR][1000 genomes]
rs9765861	0.86[EUR][1000 genomes]
rs9765929	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9765965	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9766004	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9766214	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9766444	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9766525	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9766562	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9766886	0.83[EUR][1000 genomes]
rs9767077	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9767105	0.84[EUR][1000 genomes]
rs9767113	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9767122	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9767123	0.85[EUR][1000 genomes]
rs9767192	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9767309	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9767554	0.80[EUR][1000 genomes]
rs9767652	0.88[EUR][1000 genomes]
rs9767727	0.85[EUR][1000 genomes]
rs9800580	0.82[EUR][1000 genomes]
rs9800603	0.82[EUR][1000 genomes]
rs9800614	0.84[EUR][1000 genomes]
rs9800686	0.80[EUR][1000 genomes]
rs9800736	0.85[EUR][1000 genomes]
rs9800806	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9800871	0.84[EUR][1000 genomes]
rs9968911	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886762	chr6:149866452-150174507	Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	esv1803291	chr6:150018508-150164190	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv886763	chr6:150091219-150174507	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv886764	chr6:150114745-150393683	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

mRNA abundance (count:16)

SNP	Gene	Cis/trans	Tissue	Source
rs56103941	RP11-350J20.5	cis	Esophagus Mucosa	GTEx
rs56103941	NUP43	Cis_1M	lymphoblastoid	RTeQTL
rs56103941	RAET1G	cis	Thyroid	GTEx
rs56103941	RP11-350J20.9	cis	Esophagus Mucosa	GTEx
rs56103941	NUP43	cis	Whole Blood	GTEx
rs56103941	PCMT1	cis	Esophagus Muscularis	GTEx
rs56103941	GINM1	cis	Whole Blood	GTEx
rs56103941	LRP11	cis	Skin Sun Exposed Lower leg	GTEx
rs56103941	RP11-350J20.5	cis	Skin Sun Exposed Lower leg	GTEx
rs56103941	RP11-350J20.5	cis	Adipose Subcutaneous	GTEx
rs56103941	RP11-350J20.5	cis	Thyroid	GTEx
rs56103941	RP11-350J20.5	cis	lung	GTEx
rs56103941	C6orf72	Cis_1M	lymphoblastoid	RTeQTL
rs56103941	RP11-350J20.5	cis	Artery Tibial	GTEx
rs56103941	RP11-350J20.5	cis	Esophagus Muscularis	GTEx
rs56103941	RP11-350J20.5	cis	Nerve Tibial	GTEx

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150072000-150152000	Weak transcription	Aorta	Aorta
2	chr6:150073800-150182400	Weak transcription	Fetal Brain Male	brain
3	chr6:150077400-150142400	Weak transcription	Fetal Heart	heart
4	chr6:150087200-150154000	Weak transcription	Small Intestine	intestine
5	chr6:150088000-150160400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr6:150094400-150167200	Weak transcription	Rectal Smooth Muscle	rectum
7	chr6:150098000-150144000	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr6:150105800-150176400	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr6:150112600-150167200	Weak transcription	Colon Smooth Muscle	Colon
10	chr6:150116000-150151800	Weak transcription	NHLF	lung
11	chr6:150118000-150143800	Weak transcription	Hela-S3	cervix
12	chr6:150118800-150151400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr6:150119000-150140400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr6:150119000-150144600	Weak transcription	Psoas Muscle	Psoas
15	chr6:150119000-150145600	Weak transcription	Pancreas	Pancrea
16	chr6:150119000-150146600	Weak transcription	Esophagus	oesophagus
17	chr6:150119000-150152600	Weak transcription	A549	lung
18	chr6:150119000-150164000	Weak transcription	Right Ventricle	heart
19	chr6:150119200-150142600	Weak transcription	Gastric	stomach
20	chr6:150119400-150142800	Weak transcription	Brain Angular Gyrus	brain
21	chr6:150119400-150146600	Weak transcription	NHEK	skin
22	chr6:150120000-150164600	Weak transcription	Fetal Kidney	kidney
23	chr6:150120400-150144400	Weak transcription	Spleen	Spleen
24	chr6:150120600-150142800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr6:150121400-150144200	Weak transcription	Fetal Brain Female	brain
26	chr6:150122600-150144600	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr6:150123600-150157000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr6:150123800-150140800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
29	chr6:150123800-150155800	Weak transcription	NH-A	brain
30	chr6:150124000-150146600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr6:150124600-150142200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr6:150124800-150139000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr6:150124800-150141800	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr6:150124800-150142600	Weak transcription	HSMMtube	muscle
35	chr6:150124800-150144200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr6:150124800-150151600	Weak transcription	Colonic Mucosa	Colon
37	chr6:150125200-150144600	Weak transcription	Ovary	ovary
38	chr6:150126200-150143600	Weak transcription	Osteobl	bone
39	chr6:150127800-150144400	Weak transcription	Brain Cingulate Gyrus	brain
40	chr6:150128000-150141200	Weak transcription	Fetal Stomach	stomach
41	chr6:150128000-150143200	Weak transcription	Left Ventricle	heart
42	chr6:150128000-150157200	Weak transcription	Lung	lung
43	chr6:150128200-150143200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr6:150132200-150143800	Weak transcription	HepG2	liver
45	chr6:150132600-150141000	Weak transcription	Stomach Smooth Muscle	stomach
46	chr6:150132800-150141600	Weak transcription	K562	blood
47	chr6:150132800-150142800	Weak transcription	Brain Inferior Temporal Lobe	brain
48	chr6:150132800-150144000	Weak transcription	Brain Anterior Caudate	brain
49	chr6:150132800-150144800	Weak transcription	Brain Substantia Nigra	brain
50	chr6:150132800-150146600	Weak transcription	NHDF-Ad	bronchial

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