Variant report

Variant rs880246
Chromosome Location chr6:150167108-150167109
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:150073800-150182400 Weak transcription Fetal Brain Male brain
2 chr6:150094400-150167200 Weak transcription Rectal Smooth Muscle rectum
3 chr6:150105800-150176400 Weak transcription H9 Cell Line embryonic stem cell
4 chr6:150112600-150167200 Weak transcription Colon Smooth Muscle Colon
5 chr6:150141400-150167200 Weak transcription Right Atrium heart
6 chr6:150152800-150172600 Weak transcription Aorta Aorta
7 chr6:150153000-150167800 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr6:150155800-150182600 Weak transcription Dnd41 blood
9 chr6:150156400-150168400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr6:150158600-150167200 Weak transcription Adipose Nuclei Adipose
11 chr6:150158800-150176400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr6:150159200-150172800 Weak transcription Spleen Spleen
13 chr6:150161400-150168200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr6:150162000-150167400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr6:150162200-150167400 Weak transcription HUVEC blood vessel
16 chr6:150162200-150168400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:150162200-150175800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr6:150162400-150167200 Weak transcription Stomach Mucosa stomach
19 chr6:150162600-150168200 Weak transcription Brain Substantia Nigra brain
20 chr6:150162600-150168200 Weak transcription Fetal Intestine Large intestine
21 chr6:150162600-150172000 Weak transcription Liver Liver
22 chr6:150162600-150177200 Weak transcription Fetal Lung lung
23 chr6:150163400-150169200 Enhancers Placenta Placenta
24 chr6:150163600-150175800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr6:150164000-150167200 Weak transcription Brain Hippocampus Middle brain
26 chr6:150164200-150167200 Weak transcription Brain Cingulate Gyrus brain
27 chr6:150164200-150167200 Weak transcription Duodenum Mucosa Duodenum
28 chr6:150164200-150168200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:150164200-150171800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:150164400-150167200 Weak transcription Gastric stomach
31 chr6:150164400-150167200 Weak transcription Lung lung
32 chr6:150164400-150167200 Weak transcription Right Ventricle heart
33 chr6:150164400-150167400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr6:150164400-150167400 Genic enhancers NHLF lung
35 chr6:150164400-150168400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:150164400-150169000 Weak transcription Ovary ovary
37 chr6:150164400-150181800 Weak transcription Brain Germinal Matrix brain
38 chr6:150164600-150167400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr6:150164600-150167400 Weak transcription HepG2 liver
40 chr6:150164600-150169600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:150164800-150167200 Weak transcription Pancreas Pancrea
42 chr6:150164800-150168200 Enhancers Muscle Satellite Cultured Cells --
43 chr6:150164800-150168200 Enhancers NH-A brain
44 chr6:150164800-150169400 Enhancers HMEC breast
45 chr6:150165000-150181800 Weak transcription Fetal Brain Female brain
46 chr6:150165400-150167200 Enhancers Skeletal Muscle Female skeletal muscle
47 chr6:150165400-150167400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr6:150165400-150167600 Genic enhancers NHEK skin
49 chr6:150165400-150167800 Genic enhancers Fetal Stomach stomach
50 chr6:150165400-150168600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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