Variant report

Variant	rs12528279
Chromosome Location	chr6:150072028-150072029
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:14)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:14 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:150070520-150072115	K562	blood:	n/a	n/a
2	MAZ	chr6:150070517-150072099	IMR90	lung:	n/a	chr6:150071575-150071585
3	REST	chr6:150070576-150072155	H1-neurons	neurons:	n/a	chr6:150071310-150071323 chr6:150071120-150071133
4	POLR2A	chr6:150069880-150072065	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:150070595-150072105	HepG2	liver:	n/a	n/a
6	MYC	chr6:150071467-150072125	MCF10A-Er-Src	breast:	n/a	chr6:150071575-150071585
7	MYC	chr6:150072001-150072106	MCF10A-Er-Src	breast:	n/a	n/a
8	MXI1	chr6:150070502-150072760	SK-N-SH	brain:	n/a	n/a
9	POLR2A	chr6:150070557-150072137	K562	blood:	n/a	n/a
10	ZNF384	chr6:150070610-150072087	K562	blood:	n/a	n/a
11	POLR2A	chr6:150071406-150072076	MCF10A-Er-Src	breast:	n/a	n/a
12	JUN	chr6:150070498-150072287	K562	blood:	n/a	chr6:150072129-150072138
13	FOS	chr6:150071953-150072109	MCF10A-Er-Src	breast:	n/a	n/a
14	POLR2A	chr6:150070561-150072073	HepG2	liver:	n/a	n/a

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:150038744..150042586-chr6:150067819..150072874,7	K562	blood:
2	chr6:150071379..150074045-chr6:150185232..150187132,2	MCF-7	breast:
3	chr6:149968177..149971048-chr6:150069429..150073118,6	K562	blood:
4	chr6:149967586..149970977-chr6:150068764..150072371,6	K562	blood:
5	chr6:150071337..150080563-chr6:150080588..150087592,16	K562	blood:
6	chr6:150037915..150040218-chr6:150069685..150072655,4	MCF-7	breast:
7	chr6:150069972..150072484-chr6:150117277..150119937,2	MCF-7	breast:
8	chr6:149886502..149888168-chr6:150070978..150072960,2	K562	blood:
9	chr6:150036817..150045008-chr6:150066563..150073628,17	MCF-7	breast:
10	chr6:150062172..150063933-chr6:150071828..150073596,2	MCF-7	breast:

No data

Variant related genes	Relation type
NUP43	TF binding region
ENSG00000055211	Chromatin interaction
ENSG00000131023	Chromatin interaction
ENSG00000120256	Chromatin interaction
ENSG00000231760	Chromatin interaction
ENSG00000186625	Chromatin interaction

Extended variants
information (count: 358 )
Associated
traits (count: 25 )

rSNPs within LD-proxies of this variant (count:353)

rs_ID	r²[population]
rs10214845	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10452626	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10457850	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10457851	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10747275	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10747276	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10782310	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10782311	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10782312	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10782313	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10782314	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10782315	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10782316	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10782317	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10782318	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1080670	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10872643	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10872644	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10872645	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10872646	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10872647	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs10872648	0.95[EUR][1000 genomes]
rs10872649	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10872650	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10872651	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10872652	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10872653	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10872656	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.84[EUR][1000 genomes]
rs1108889	1.00[CEU][hapmap];0.87[CHB][hapmap];0.93[TSI][hapmap]
rs1112729	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1112730	0.95[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155662	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11155668	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11155669	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11155670	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11155671	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11155674	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155675	0.93[EUR][1000 genomes]
rs11155676	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11155677	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155679	0.95[EUR][1000 genomes]
rs11155680	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155681	0.85[EUR][1000 genomes]
rs11155682	0.86[EUR][1000 genomes]
rs11155683	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155685	0.95[CEU][hapmap];0.87[CHB][hapmap];0.86[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11155689	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs1125	0.95[CEU][hapmap];0.91[TSI][hapmap];0.92[EUR][1000 genomes]
rs11968921	0.83[EUR][1000 genomes]
rs12111376	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12174349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12174716	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12175504	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12175575	0.91[EUR][1000 genomes]
rs12176034	0.91[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs12178310	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12179031	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12182220	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12183664	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12191643	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12193364	0.87[EUR][1000 genomes]
rs12195866	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12200670	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12201033	0.91[EUR][1000 genomes]
rs12203703	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12205092	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12206402	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12210605	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12211511	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12213779	0.91[EUR][1000 genomes]
rs12234128	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs12523793	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12525871	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12526675	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12529698	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12660304	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12662162	0.90[EUR][1000 genomes]
rs12662174	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13215691	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1413654	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1413655	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs1572229	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap]
rs17672976	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17673294	0.85[EUR][1000 genomes]
rs17745062	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1889473	0.84[EUR][1000 genomes]
rs1934534	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1984111	0.84[EUR][1000 genomes]
rs2064520	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2064521	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2065663	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2065664	0.95[CEU][hapmap];0.80[CHB][hapmap];0.88[JPT][hapmap];0.98[TSI][hapmap];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2095375	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs2144207	0.81[EUR][1000 genomes]
rs2151909	0.85[EUR][1000 genomes]
rs2151912	0.84[EUR][1000 genomes]
rs2151913	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.81[MEX][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs2184369	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2184370	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2185352	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2275045	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2275046	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs2297928	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2297930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2297932	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2342764	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[EUR][1000 genomes]
rs2342765	0.95[CEU][hapmap];0.89[TSI][hapmap]
rs2342857	0.86[EUR][1000 genomes]
rs2342858	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs2342860	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2342861	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2880435	0.83[EUR][1000 genomes]
rs2880436	1.00[CEU][hapmap];0.87[CHB][hapmap]
rs34157004	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34337297	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35031906	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35443312	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35763894	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35830138	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35961297	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35967444	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3734295	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.84[MKK][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3763161	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3763162	0.95[CEU][hapmap];0.87[CHB][hapmap];0.86[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.86[EUR][1000 genomes]
rs3763163	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.86[EUR][1000 genomes]
rs3777949	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.93[TSI][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3798761	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805748	0.90[EUR][1000 genomes]
rs3805749	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3805750	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3805751	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3805752	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3805753	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3828700	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3924871	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4039600	0.89[EUR][1000 genomes]
rs4242279	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4354168	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4380763	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4421206	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4455682	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4552	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs4642491	0.90[EUR][1000 genomes]
rs4816	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4869730	0.86[EUR][1000 genomes]
rs4869731	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs4869750	0.95[CEU][hapmap];0.89[TSI][hapmap]
rs4869812	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4869923	0.80[EUR][1000 genomes]
rs4869966	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4870015	0.84[EUR][1000 genomes]
rs4870019	0.85[EUR][1000 genomes]
rs4870020	0.85[EUR][1000 genomes]
rs4870048	0.84[EUR][1000 genomes]
rs4870049	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4870050	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4870052	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs4870054	0.95[CEU][hapmap];0.91[TSI][hapmap]
rs4870139	0.89[EUR][1000 genomes]
rs4870144	0.90[EUR][1000 genomes]
rs4870267	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4870388	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4870493	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4870509	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4870529	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55763431	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs55849538	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55938765	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55993747	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56091542	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56103941	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56374774	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56397000	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57938011	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58189451	0.87[EUR][1000 genomes]
rs60424881	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62439811	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62439836	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62439837	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62439840	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62439842	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62439843	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62441279	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62441284	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62441303	0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62441335	0.86[EUR][1000 genomes]
rs6420132	0.84[EUR][1000 genomes]
rs66516768	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6899661	0.86[EUR][1000 genomes]
rs6903998	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs6913486	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6914319	0.86[EUR][1000 genomes]
rs6936395	0.86[EUR][1000 genomes]
rs7381555	0.85[EUR][1000 genomes]
rs7450246	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7738696	1.00[CEU][hapmap];0.87[CHB][hapmap]
rs7740278	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7740784	0.89[EUR][1000 genomes]
rs7744015	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7744105	1.00[CEU][hapmap];0.87[CHB][hapmap];0.93[TSI][hapmap]
rs7745915	0.84[EUR][1000 genomes]
rs7752089	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7752594	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7753812	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7754399	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7764846	0.85[EUR][1000 genomes]
rs7767622	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7769115	1.00[CEU][hapmap];0.87[CHB][hapmap];0.93[TSI][hapmap]
rs7818	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.85[EUR][1000 genomes]
rs868375	0.95[CEU][hapmap]
rs880245	1.00[CEU][hapmap];0.87[CHB][hapmap];0.93[TSI][hapmap]
rs880246	1.00[CEU][hapmap];0.92[CHB][hapmap]
rs9027	0.85[CHB][hapmap];0.82[JPT][hapmap];0.84[EUR][1000 genomes]
rs9285521	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.88[GIH][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap];0.85[EUR][1000 genomes]
rs9285522	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9285523	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9285524	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9285525	0.84[EUR][1000 genomes]
rs9286597	0.81[EUR][1000 genomes]
rs9322188	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.81[ASN][1000 genomes]
rs9322189	0.87[CEU][hapmap];0.87[EUR][1000 genomes]
rs9322190	0.80[EUR][1000 genomes]
rs9322192	0.85[EUR][1000 genomes]
rs9322193	0.91[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.91[TSI][hapmap];0.86[EUR][1000 genomes]
rs9322194	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9322196	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9322197	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9322198	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9322199	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9322200	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9322204	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322206	0.95[CEU][hapmap];0.80[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.82[MEX][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9322207	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9322208	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9322209	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9322210	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9322214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9322215	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9322217	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9322218	0.95[CEU][hapmap];0.81[CHB][hapmap];0.82[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322219	0.91[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322220	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9322221	0.91[EUR][1000 genomes]
rs9322223	0.84[EUR][1000 genomes]
rs9322224	0.84[EUR][1000 genomes]
rs933055	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs9371199	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9371201	0.95[CEU][hapmap];0.98[TSI][hapmap];0.83[EUR][1000 genomes]
rs9371486	0.84[EUR][1000 genomes]
rs9372044	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9377228	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9377229	0.91[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.91[TSI][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9377230	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9379314	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9379348	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9383546	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs9383812	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9383844	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9393132	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9393175	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9397022	0.86[EUR][1000 genomes]
rs9397357	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.86[EUR][1000 genomes]
rs9399692	0.84[EUR][1000 genomes]
rs9399693	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9404047	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9404048	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9406286	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9406345	0.91[EUR][1000 genomes]
rs9406346	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9478291	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.99[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9478848	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs9479094	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.95[TSI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9479494	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9479808	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.90[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9479810	0.95[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9480009	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9480031	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9485405	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9485408	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9498382	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9498384	0.89[EUR][1000 genomes]
rs9505823	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9505824	0.93[EUR][1000 genomes]
rs9505826	0.89[EUR][1000 genomes]
rs9505967	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9505972	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9505974	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9505975	0.86[EUR][1000 genomes]
rs9505982	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9505983	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs952165	0.95[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs952166	0.84[EUR][1000 genomes]
rs958953	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9688350	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9688412	0.95[CEU][hapmap];0.87[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.98[TSI][hapmap];0.84[EUR][1000 genomes]
rs9688452	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9688517	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9688699	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9688750	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9688794	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9688803	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688809	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688858	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9688861	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9688867	0.90[EUR][1000 genomes]
rs9688897	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688902	0.88[EUR][1000 genomes]
rs9688938	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9688940	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689025	0.86[EUR][1000 genomes]
rs9689036	0.95[CEU][hapmap];0.86[CHB][hapmap];0.88[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9689084	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9689242	0.89[EUR][1000 genomes]
rs9689269	0.91[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689340	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9689447	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9689599	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9689694	0.89[EUR][1000 genomes]
rs9689702	0.94[CHB][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9689716	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9689723	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9717327	0.88[EUR][1000 genomes]
rs9718079	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.94[JPT][hapmap];0.90[MEX][hapmap];0.87[TSI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9765861	0.86[EUR][1000 genomes]
rs9765929	0.91[EUR][1000 genomes]
rs9765965	0.90[EUR][1000 genomes]
rs9766004	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9766037	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9766214	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9766444	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9766525	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9766562	0.91[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9766886	1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9767077	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9767105	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9767113	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9767122	1.00[CEU][hapmap];0.85[CHB][hapmap];0.88[JPT][hapmap];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9767123	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9767192	0.84[EUR][1000 genomes]
rs9767309	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9767554	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9767555	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.87[TSI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9767652	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9767713	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.86[GIH][hapmap];0.94[JPT][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9767727	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9800580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9800603	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9800614	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9800686	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes]
rs9800736	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9800806	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9800871	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9968911	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886762	chr6:149866452-150174507	Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	esv1792620	chr6:149909491-150083621	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	esv3475167	chr6:150003006-150086225	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	esv3475168	chr6:150003006-150086225	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
5	esv1803291	chr6:150018508-150164190	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:25)

SNP	Gene	Cis/trans	Tissue	Source
rs12528279	NUP43	cis	Whole Blood	GTEx
rs12528279	RP11-350J20.5	cis	Skin Sun Exposed Lower leg	GTEx
rs12528279	RP11-350J20.5	cis	lung	GTEx
rs12528279	FBXO30	cis	cerebellum	SCAN
rs12528279	RP11-350J20.5	cis	Adipose Subcutaneous	GTEx
rs12528279	NUP43	Cis_1M	lymphoblastoid	RTeQTL
rs12528279	RP11-350J20.5	cis	Esophagus Mucosa	GTEx
rs12528279	RP11-350J20.9	cis	Esophagus Mucosa	GTEx
rs12528279	PPIL4	cis	cerebellum	SCAN
rs12528279	RP11-350J20.5	cis	Esophagus Muscularis	GTEx
rs12528279	RP11-350J20.5	cis	Artery Tibial	GTEx
rs12528279	PCMT1	cis	Esophagus Muscularis	GTEx
rs12528279	GINM1	cis	Whole Blood	GTEx
rs12528279	RP11-350J20.5	cis	Thyroid	GTEx
rs12528279	RAET1G	cis	Artery Tibial	GTEx
rs12528279	C6orf72	Cis_1M	lymphoblastoid	RTeQTL
rs12528279	LATS1	cis	parietal	SCAN
rs12528279	RMND1	cis	cerebellum	SCAN
rs12528279	RP11-350J20.5	cis	Artery Aorta	GTEx
rs12528279	PPIL4	cis	parietal	SCAN
rs12528279	RAET1G	cis	Thyroid	GTEx
rs12528279	LRP11	cis	cerebellum	SCAN
rs12528279	LATS1	cis	cerebellum	SCAN
rs12528279	RP11-350J20.5	cis	Nerve Tibial	GTEx
rs12528279	LRP11	cis	parietal	SCAN

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150070000-150072200	Active TSS	iPS-18 Cell Line	embryonic stem cell
2	chr6:150070000-150072200	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr6:150070000-150072400	Active TSS	HUES64 Cell Line	embryonic stem cell
4	chr6:150070000-150072400	Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr6:150070000-150072400	Active TSS	Breast Myoepithelial Primary Cells	Breast
6	chr6:150070000-150072600	Active TSS	HUES6 Cell Line	embryonic stem cell
7	chr6:150070000-150072600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr6:150070000-150073000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:150070200-150072200	Active TSS	HUES48 Cell Line	embryonic stem cell
10	chr6:150070200-150072200	Active TSS	iPS-20b Cell Line	embryonic stem cell
11	chr6:150070200-150072200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:150070200-150072200	Active TSS	A549	lung
13	chr6:150070200-150072200	Active TSS	GM12878-XiMat	blood
14	chr6:150070200-150072400	Active TSS	H1 Cell Line	embryonic stem cell
15	chr6:150070200-150072400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr6:150070200-150072400	Active TSS	Muscle Satellite Cultured Cells	--
17	chr6:150070200-150072400	Active TSS	HSMM	muscle
18	chr6:150070200-150072400	Active TSS	HSMMtube	muscle
19	chr6:150070200-150072600	Active TSS	ES-I3 Cell Line	embryonic stem cell
20	chr6:150070200-150072800	Active TSS	K562	blood
21	chr6:150070400-150072400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr6:150070400-150072400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr6:150070400-150072400	Active TSS	NHLF	lung
24	chr6:150070400-150072600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr6:150070400-150072800	Active TSS	HMEC	breast
26	chr6:150070600-150072200	Active TSS	NHDF-Ad	bronchial
27	chr6:150070600-150072400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr6:150070600-150072400	Active TSS	Psoas Muscle	Psoas
29	chr6:150071000-150072200	Flanking Active TSS	Primary hematopoietic stem cells	blood
30	chr6:150071000-150072200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
31	chr6:150071200-150072200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
32	chr6:150071400-150072200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr6:150071400-150072200	Flanking Active TSS	Fetal Muscle Leg	muscle
34	chr6:150071400-150072200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
35	chr6:150071400-150072200	Active TSS	Right Atrium	heart
36	chr6:150071400-150072200	Flanking Active TSS	Dnd41	blood
37	chr6:150071400-150072400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr6:150071400-150072400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
39	chr6:150071400-150072400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr6:150071400-150072400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
41	chr6:150071400-150073200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
42	chr6:150071600-150072200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
43	chr6:150071600-150072200	Flanking Active TSS	Brain Hippocampus Middle	brain
44	chr6:150071600-150072200	Flanking Active TSS	Duodenum Mucosa	Duodenum
45	chr6:150071600-150072200	Flanking Active TSS	Fetal Thymus	thymus
46	chr6:150071600-150072200	Flanking Active TSS	Stomach Smooth Muscle	stomach
47	chr6:150071600-150072200	Flanking Active TSS	Thymus	Thymus
48	chr6:150071600-150072200	Flanking Active TSS	HUVEC	blood vessel
49	chr6:150071600-150072200	Flanking Active TSS	NH-A	brain
50	chr6:150071600-150072400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived

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