The 2.0 version of rSNPBase

Variant report

Variant rs4870388
Chromosome Location chr6:150009595-150009596
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149977200-150022600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:149977800-150020600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr6:149978000-150029200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:149980600-150024800 Strong transcription Fetal Thymus thymus
5 chr6:149981200-150018800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr6:149987000-150036800 Weak transcription Hela-S3 cervix
7 chr6:149994600-150012600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr6:149997800-150027400 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr6:149998000-150020800 Weak transcription Small Intestine intestine
10 chr6:149998000-150029800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr6:149998800-150009600 Weak transcription Colon Smooth Muscle Colon
12 chr6:150000000-150022000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr6:150002800-150010200 Strong transcription Fetal Stomach stomach
14 chr6:150002800-150012800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
15 chr6:150004200-150017000 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr6:150005400-150015200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr6:150005400-150016000 Weak transcription Fetal Brain Male brain
18 chr6:150005400-150021000 Weak transcription Stomach Mucosa stomach
19 chr6:150005400-150029800 Weak transcription Rectal Smooth Muscle rectum
20 chr6:150005600-150009800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr6:150005600-150010400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr6:150005600-150011200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:150005600-150011600 Weak transcription Ovary ovary
24 chr6:150005600-150012000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:150005600-150012000 Weak transcription GM12878-XiMat blood
26 chr6:150005600-150012200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr6:150005600-150012200 Weak transcription NH-A brain
28 chr6:150005600-150012400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr6:150005600-150012400 Weak transcription Colonic Mucosa Colon
30 chr6:150005600-150012400 Weak transcription NHDF-Ad bronchial
31 chr6:150005600-150013800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr6:150005600-150014000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:150005600-150014800 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr6:150005600-150015400 Weak transcription Placenta Amnion Placenta Amnion
35 chr6:150005600-150016200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:150005600-150016400 Weak transcription Brain Cingulate Gyrus brain
37 chr6:150005600-150018000 Weak transcription H1 Cell Line embryonic stem cell
38 chr6:150005600-150018200 Weak transcription A549 lung
39 chr6:150005600-150023000 Weak transcription Brain Inferior Temporal Lobe brain
40 chr6:150005600-150029600 Weak transcription Aorta Aorta
41 chr6:150005600-150030200 Weak transcription H9 Cell Line embryonic stem cell
42 chr6:150005600-150030200 Weak transcription Fetal Heart heart
43 chr6:150005600-150030400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr6:150005600-150030400 Weak transcription HSMMtube muscle
45 chr6:150005600-150037400 Weak transcription Esophagus oesophagus
46 chr6:150005600-150037800 Weak transcription Gastric stomach
47 chr6:150005800-150009600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr6:150005800-150009800 Weak transcription Lung lung
49 chr6:150005800-150010200 Weak transcription Primary B cells from peripheral blood blood
50 chr6:150005800-150010200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015