Variant report

Variant rs9800580
Chromosome Location chr6:149953981-149953982
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149915600-149968400 Weak transcription Pancreas Pancrea
2 chr6:149915600-149969200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:149915800-149969200 Weak transcription Gastric stomach
4 chr6:149918800-149967600 Weak transcription HUVEC blood vessel
5 chr6:149918800-149967600 Weak transcription NHLF lung
6 chr6:149924800-149967400 Weak transcription Colon Smooth Muscle Colon
7 chr6:149924800-149968000 Weak transcription Fetal Kidney kidney
8 chr6:149925200-149967000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr6:149935000-149967000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr6:149935200-149959200 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr6:149935200-149966200 Weak transcription Hela-S3 cervix
12 chr6:149935200-149967800 Weak transcription H1 Cell Line embryonic stem cell
13 chr6:149935200-149968000 Weak transcription Brain Angular Gyrus brain
14 chr6:149935200-149969000 Weak transcription Small Intestine intestine
15 chr6:149935400-149958200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:149935400-149968000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr6:149935600-149968000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr6:149935600-149968400 Weak transcription Esophagus oesophagus
19 chr6:149935800-149968600 Weak transcription Aorta Aorta
20 chr6:149936000-149967000 Weak transcription Primary hematopoietic stem cells blood
21 chr6:149936000-149967200 Weak transcription HMEC breast
22 chr6:149936000-149968000 Weak transcription Right Ventricle heart
23 chr6:149936800-149969000 Weak transcription Lung lung
24 chr6:149937400-149968000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr6:149938400-149960800 Weak transcription Fetal Heart heart
26 chr6:149940000-149958400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr6:149940200-149954200 Strong transcription Dnd41 blood
28 chr6:149941200-149956400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr6:149941400-149967600 Weak transcription Brain Substantia Nigra brain
30 chr6:149941400-149967600 Weak transcription Fetal Brain Male brain
31 chr6:149941400-149968000 Weak transcription Brain Hippocampus Middle brain
32 chr6:149942200-149967600 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr6:149942800-149954000 Strong transcription Primary T cells fromperipheralblood blood
34 chr6:149943400-149968000 Weak transcription Brain Cingulate Gyrus brain
35 chr6:149943800-149955400 Weak transcription Colonic Mucosa Colon
36 chr6:149944600-149957400 Weak transcription NHEK skin
37 chr6:149944600-149959200 Weak transcription Ovary ovary
38 chr6:149944600-149964000 Weak transcription NHDF-Ad bronchial
39 chr6:149944800-149963800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr6:149944800-149969400 Weak transcription Spleen Spleen
41 chr6:149947000-149968200 Weak transcription H9 Cell Line embryonic stem cell
42 chr6:149947600-149955000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:149947600-149956800 Weak transcription Placenta Amnion Placenta Amnion
44 chr6:149948200-149954000 Strong transcription Adipose Nuclei Adipose
45 chr6:149948200-149954200 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr6:149948200-149957000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr6:149948800-149954000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr6:149949200-149957600 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr6:149949200-149958200 Weak transcription Psoas Muscle Psoas
50 chr6:149949200-149964200 Weak transcription Osteobl bone

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