Variant report

Variant rs9535665
Chromosome Location chr13:52004676-52004677
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51945800-52016600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr13:51949400-52025000 Weak transcription Fetal Muscle Leg muscle
3 chr13:51950000-52025200 Weak transcription Fetal Muscle Trunk muscle
4 chr13:51963200-52024800 Weak transcription Fetal Intestine Large intestine
5 chr13:51971800-52025000 Weak transcription Fetal Stomach stomach
6 chr13:51972000-52005200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr13:51972000-52016000 Weak transcription Pancreas Pancrea
8 chr13:51984400-52024800 Weak transcription Placenta Amnion Placenta Amnion
9 chr13:51988800-52024400 Weak transcription Rectal Smooth Muscle rectum
10 chr13:51990000-52016600 Weak transcription Fetal Intestine Small intestine
11 chr13:51991400-52006200 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr13:51992400-52025400 Weak transcription Esophagus oesophagus
13 chr13:51994600-52005600 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr13:51995400-52023400 Weak transcription Fetal Kidney kidney
15 chr13:51995400-52024600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr13:51995600-52019000 Weak transcription Gastric stomach
17 chr13:51995600-52023400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr13:51995600-52025000 Weak transcription Right Ventricle heart
19 chr13:51995600-52025600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr13:51995800-52008000 Weak transcription Hela-S3 cervix
21 chr13:51997000-52007200 Weak transcription Psoas Muscle Psoas
22 chr13:51997000-52025200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr13:51997400-52024400 Weak transcription Thymus Thymus
24 chr13:51997600-52006600 Weak transcription Fetal Heart heart
25 chr13:51997600-52023200 Weak transcription Primary hematopoietic stem cells blood
26 chr13:51997600-52023600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr13:51999400-52007200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr13:51999800-52006400 Weak transcription Brain Angular Gyrus brain
29 chr13:51999800-52011800 Weak transcription Left Ventricle heart
30 chr13:51999800-52022400 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr13:51999800-52023000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr13:52000000-52006200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr13:52000000-52007600 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr13:52000200-52005200 Weak transcription Brain Substantia Nigra brain
35 chr13:52000400-52006800 Weak transcription Primary T cells from cord blood blood
36 chr13:52000600-52009800 Weak transcription HSMMtube muscle
37 chr13:52000600-52025200 Weak transcription Small Intestine intestine
38 chr13:52000800-52005400 Strong transcription HSMM muscle
39 chr13:52001000-52010000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr13:52001200-52005600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr13:52001200-52005600 Strong transcription NH-A brain
42 chr13:52001200-52022800 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr13:52001400-52005600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr13:52001400-52024600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr13:52001600-52004800 Strong transcription Placenta Placenta
46 chr13:52001600-52005000 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr13:52001600-52005000 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr13:52001600-52006000 Weak transcription Colon Smooth Muscle Colon
49 chr13:52001600-52006400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr13:52001600-52007600 Strong transcription GM12878-XiMat blood

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