Variant report
| Variant | rs9584488 |
|---|---|
| Chromosome Location | chr13:97731758-97731759 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:32)
| rs_ID | r2[population] |
|---|---|
| rs13378951 | 1.00[EUR][1000 genomes] |
| rs16953949 | 1.00[EUR][1000 genomes] |
| rs1999833 | 1.00[EUR][1000 genomes] |
| rs28488241 | 1.00[EUR][1000 genomes] |
| rs4053687 | 1.00[EUR][1000 genomes] |
| rs7317397 | 1.00[EUR][1000 genomes] |
| rs7325474 | 1.00[EUR][1000 genomes] |
| rs73549299 | 1.00[EUR][1000 genomes] |
| rs7492110 | 1.00[EUR][1000 genomes] |
| rs9300371 | 1.00[EUR][1000 genomes] |
| rs9300381 | 1.00[EUR][1000 genomes] |
| rs9300388 | 1.00[EUR][1000 genomes] |
| rs9300390 | 1.00[EUR][1000 genomes] |
| rs9300391 | 1.00[EUR][1000 genomes] |
| rs9582078 | 1.00[EUR][1000 genomes] |
| rs9582111 | 1.00[EUR][1000 genomes] |
| rs9582112 | 1.00[EUR][1000 genomes] |
| rs9582113 | 1.00[EUR][1000 genomes] |
| rs9582114 | 1.00[EUR][1000 genomes] |
| rs9582119 | 1.00[EUR][1000 genomes] |
| rs9582120 | 1.00[EUR][1000 genomes] |
| rs9584460 | 1.00[EUR][1000 genomes] |
| rs9584503 | 1.00[EUR][1000 genomes] |
| rs9584504 | 1.00[EUR][1000 genomes] |
| rs9584508 | 1.00[EUR][1000 genomes] |
| rs9584514 | 1.00[EUR][1000 genomes] |
| rs9584519 | 1.00[EUR][1000 genomes] |
| rs9584521 | 1.00[EUR][1000 genomes] |
| rs9584523 | 1.00[EUR][1000 genomes] |
| rs9584525 | 1.00[EUR][1000 genomes] |
| rs9584531 | 1.00[EUR][1000 genomes] |
| rs9584536 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv832693 | chr13:97594845-97777481 | Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:97730800-97734200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 2 | chr13:97730800-97734200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
