Variant report

Variant	rs9609649
Chromosome Location	chr22:33282418-33282419
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:33275938..33278080-chr22:33280895..33283450,2	K562	blood:
2	chr22:33277550..33279895-chr22:33281919..33283776,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1010432	0.95[JPT][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11547635	1.00[YRI][hapmap]
rs13054969	0.81[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs13057857	0.85[AMR][1000 genomes]
rs16991750	1.00[YRI][hapmap]
rs2016169	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35640347	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56708022	0.83[AFR][1000 genomes]
rs57322960	0.83[AFR][1000 genomes]
rs59471311	0.83[AFR][1000 genomes]
rs61062818	0.83[AFR][1000 genomes]
rs916396	0.82[CHB][hapmap];0.87[JPT][hapmap];0.82[ASN][1000 genomes]
rs9606997	1.00[CEU][hapmap];0.91[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9606998	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609647	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9609648	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9609651	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9609652	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609653	0.88[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9609654	0.87[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9609655	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9609656	0.81[CHB][hapmap];0.86[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9609657	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9609658	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33265600-33287000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr22:33270800-33287200	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr22:33274200-33286200	Enhancers	Fetal Heart	heart
4	chr22:33275400-33285400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr22:33275800-33284000	Enhancers	Fetal Stomach	stomach
6	chr22:33277000-33284800	Weak transcription	Ovary	ovary
7	chr22:33277000-33302000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr22:33277600-33282800	Weak transcription	Right Atrium	heart
9	chr22:33277600-33283800	Weak transcription	HSMMtube	muscle
10	chr22:33277600-33285000	Weak transcription	Left Ventricle	heart
11	chr22:33278200-33283400	Weak transcription	Right Ventricle	heart
12	chr22:33279400-33282800	Weak transcription	Placenta	Placenta
13	chr22:33279600-33283000	Weak transcription	Primary hematopoietic stem cells	blood
14	chr22:33279600-33287000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr22:33280000-33284800	Weak transcription	Fetal Kidney	kidney
16	chr22:33280000-33287400	Weak transcription	Fetal Thymus	thymus
17	chr22:33280200-33282600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr22:33281800-33283400	Enhancers	Fetal Muscle Leg	muscle
19	chr22:33281800-33285200	Enhancers	K562	blood
20	chr22:33282000-33283000	Strong transcription	HUES48 Cell Line	embryonic stem cell
21	chr22:33282200-33282600	Weak transcription	Fetal Brain Male	brain
22	chr22:33282200-33283000	Enhancers	Fetal Muscle Trunk	muscle
23	chr22:33282200-33284800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr22:33282200-33285200	Enhancers	Fetal Lung	lung
25	chr22:33282200-33289400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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