Variant report

Variant	rs1010432
Chromosome Location	chr22:33314914-33314915
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:33300095..33301805-chr22:33313457..33316283,2	MCF-7	breast:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12169637	0.83[YRI][hapmap]
rs13054969	0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs137512	0.84[YRI][hapmap]
rs137518	0.83[YRI][hapmap]
rs137554	0.84[ASN][1000 genomes]
rs2016169	0.84[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2020103	0.81[AMR][1000 genomes]
rs35640347	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs756550	0.81[ASN][1000 genomes]
rs916396	0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9606997	0.95[JPT][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9606998	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9609647	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9609648	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9609649	0.95[JPT][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9609651	0.84[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9609652	0.84[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9609653	0.84[CHB][hapmap];0.90[JPT][hapmap];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9609654	0.88[CHB][hapmap];0.91[JPT][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609655	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9609656	0.90[CHB][hapmap];0.90[JPT][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609657	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9609658	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609663	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33312800-33318400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr22:33313200-33318400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr22:33313400-33315000	Enhancers	Fetal Muscle Trunk	muscle
4	chr22:33313400-33315000	Enhancers	Fetal Muscle Leg	muscle
5	chr22:33313400-33315000	Enhancers	Spleen	Spleen
6	chr22:33313400-33315200	Enhancers	Fetal Stomach	stomach
7	chr22:33313400-33317800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr22:33313400-33319600	Enhancers	Fetal Lung	lung
9	chr22:33313600-33317000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr22:33313800-33315200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr22:33314000-33316000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr22:33314000-33316000	Weak transcription	Rectal Smooth Muscle	rectum
13	chr22:33314000-33316200	Weak transcription	Fetal Brain Female	brain
14	chr22:33314000-33380800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr22:33314200-33315000	Enhancers	Colonic Mucosa	Colon
16	chr22:33314200-33315600	Strong transcription	HUES48 Cell Line	embryonic stem cell
17	chr22:33314200-33316000	Weak transcription	Adipose Nuclei	Adipose
18	chr22:33314200-33316000	Weak transcription	Fetal Brain Male	brain
19	chr22:33314200-33316000	Weak transcription	Left Ventricle	heart
20	chr22:33314200-33316200	Weak transcription	Right Ventricle	heart
21	chr22:33314200-33316600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr22:33314200-33318600	Weak transcription	H1 Cell Line	embryonic stem cell
23	chr22:33314200-33323800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
24	chr22:33314200-33332200	Weak transcription	HepG2	liver
25	chr22:33314400-33315000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr22:33314400-33316000	Weak transcription	Fetal Heart	heart
27	chr22:33314600-33315600	Enhancers	Fetal Kidney	kidney
28	chr22:33314800-33315000	Enhancers	Placenta	Placenta
29	chr22:33314800-33315000	Enhancers	Right Atrium	heart

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