Variant report

Variant	rs9609658
Chromosome Location	chr22:33319827-33319828
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1010432	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13054969	0.91[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2016169	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35640347	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs916396	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9606997	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9606998	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9609647	0.87[AMR][1000 genomes]
rs9609648	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9609649	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9609651	0.89[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs9609652	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9609653	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9609654	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9609655	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609656	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9609657	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609663	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33314000-33380800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr22:33314200-33323800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr22:33314200-33332200	Weak transcription	HepG2	liver
4	chr22:33315600-33328200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr22:33316800-33320800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr22:33318400-33320600	Strong transcription	HUES48 Cell Line	embryonic stem cell
7	chr22:33318600-33320800	Strong transcription	H1 Cell Line	embryonic stem cell
8	chr22:33319200-33324800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr22:33319200-33333000	Weak transcription	Fetal Brain Male	brain
10	chr22:33319600-33325400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr22:33319600-33325600	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr22:33319600-33326800	Weak transcription	HUES64 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links