Variant report

Variant	rs35640347
Chromosome Location	chr22:33300137-33300138
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1010432	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13054969	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs137554	0.80[ASN][1000 genomes]
rs2016169	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs916396	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9606997	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9606998	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9609647	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9609648	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9609649	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9609651	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9609653	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9609654	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9609655	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609656	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9609657	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9609658	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9609663	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33277000-33302000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr22:33287800-33309600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr22:33287800-33312000	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr22:33290000-33312000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr22:33293600-33301400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr22:33298000-33306800	Weak transcription	K562	blood
7	chr22:33298400-33300800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr22:33299400-33302400	Enhancers	Fetal Brain Male	brain
9	chr22:33299400-33302400	Enhancers	Fetal Heart	heart
10	chr22:33299600-33302400	Enhancers	Fetal Brain Female	brain
11	chr22:33300000-33300200	Weak transcription	Fetal Stomach	stomach
12	chr22:33300000-33301000	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr22:33300000-33301200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr22:33300000-33307000	Weak transcription	Brain Substantia Nigra	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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