Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26301899..26303918-chr4:26305845..26308033,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10461084	0.85[ASN][1000 genomes]
rs10939104	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10939111	1.00[YRI][hapmap]
rs11722744	1.00[YRI][hapmap]
rs11726888	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11727747	0.95[YRI][hapmap]
rs11728265	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12639629	0.94[YRI][hapmap]
rs12639856	0.85[ASN][1000 genomes]
rs13109468	0.82[ASN][1000 genomes]
rs13109842	0.92[CEU][hapmap];0.82[JPT][hapmap]
rs13114817	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13114911	1.00[YRI][hapmap]
rs13115260	0.94[YRI][hapmap]
rs13119840	0.95[YRI][hapmap]
rs13123863	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13128014	0.95[YRI][hapmap]
rs13128399	0.92[CEU][hapmap]
rs13133397	0.94[YRI][hapmap]
rs13135696	0.92[CEU][hapmap];1.00[YRI][hapmap]
rs13138863	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13142370	0.89[ASN][1000 genomes]
rs1397730	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1877207	0.92[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs2063444	0.85[ASN][1000 genomes]
rs3762930	0.92[CEU][hapmap]
rs4536914	1.00[YRI][hapmap]
rs4692532	0.95[YRI][hapmap]
rs56035229	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9996988	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829889	chr4:26169954-26338313	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26301600-26320600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr4:26304600-26308800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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