Variant report

Variant	rs11822592
Chromosome Location	chr11:77325222-77325223
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:77324790-77325513	PFSK-1	brain:	n/a	n/a
2	POLR2A	chr11:77323942-77325295	K562	blood:	n/a	n/a
3	POLR2A	chr11:77325163-77325233	K562	blood:	n/a	n/a
4	POLR2A	chr11:77325095-77325310	K562	blood:	n/a	n/a
5	POLR2A	chr11:77325163-77325614	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:77322572..77324636-chr11:77324942..77327014,3	K562	blood:
2	chr11:77323618..77326962-chr11:77347441..77350809,3	MCF-7	breast:
3	chr11:77256317..77259105-chr11:77324421..77327303,2	MCF-7	breast:

Variant related genes	Relation type
CLNS1A	TF binding region
ENSG00000074201	Chromatin interaction

Extended variants
information (count: 255 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:244)

rs_ID	r²[population]
rs11237234	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11237271	0.91[EUR][1000 genomes]
rs11237274	0.91[EUR][1000 genomes]
rs11823751	0.91[EUR][1000 genomes]
rs11824150	0.91[EUR][1000 genomes]
rs11825573	0.91[EUR][1000 genomes]
rs11827357	0.90[EUR][1000 genomes]
rs11828664	0.88[EUR][1000 genomes]
rs12417215	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12417232	0.91[EUR][1000 genomes]
rs12417488	0.91[EUR][1000 genomes]
rs12417760	0.90[EUR][1000 genomes]
rs12417823	0.91[EUR][1000 genomes]
rs12418152	0.91[EUR][1000 genomes]
rs12418261	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12418476	0.91[EUR][1000 genomes]
rs12418559	0.91[EUR][1000 genomes]
rs12418734	0.91[EUR][1000 genomes]
rs12418844	0.91[EUR][1000 genomes]
rs12419186	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12419685	0.91[EUR][1000 genomes]
rs12420021	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12420092	0.87[EUR][1000 genomes]
rs12420401	0.90[EUR][1000 genomes]
rs12421391	0.91[EUR][1000 genomes]
rs12421695	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12421699	0.91[EUR][1000 genomes]
rs12574660	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12574999	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12575014	0.91[EUR][1000 genomes]
rs12575150	0.91[EUR][1000 genomes]
rs12575305	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12575763	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12577552	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12806790	0.88[EUR][1000 genomes]
rs1540179	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1544272	0.91[EUR][1000 genomes]
rs1544273	0.91[EUR][1000 genomes]
rs1544274	0.91[EUR][1000 genomes]
rs17135800	0.91[EUR][1000 genomes]
rs17135807	0.91[EUR][1000 genomes]
rs17135809	0.91[EUR][1000 genomes]
rs17135811	0.91[EUR][1000 genomes]
rs17135905	0.90[EUR][1000 genomes]
rs1892869	0.91[EUR][1000 genomes]
rs1893901	0.91[EUR][1000 genomes]
rs1945751	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1986474	0.91[EUR][1000 genomes]
rs2154973	0.91[EUR][1000 genomes]
rs2154988	0.91[EUR][1000 genomes]
rs2156842	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2186573	0.91[EUR][1000 genomes]
rs2187547	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2276415	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2276416	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2298820	0.91[EUR][1000 genomes]
rs28421376	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28610388	0.91[EUR][1000 genomes]
rs28730304	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28930682	0.91[EUR][1000 genomes]
rs34446294	0.91[EUR][1000 genomes]
rs35546645	0.87[EUR][1000 genomes]
rs35774637	0.91[EUR][1000 genomes]
rs3781616	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3781617	0.91[EUR][1000 genomes]
rs3819211	0.91[EUR][1000 genomes]
rs3949117	0.91[EUR][1000 genomes]
rs4269952	0.90[EUR][1000 genomes]
rs4301811	0.89[ASN][1000 genomes]
rs4399350	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4486654	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4531493	0.91[EUR][1000 genomes]
rs4553396	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4578411	0.90[EUR][1000 genomes]
rs4606503	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4944169	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4944170	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4944171	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4944173	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4944175	0.91[EUR][1000 genomes]
rs4944176	0.90[EUR][1000 genomes]
rs4945182	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4945183	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4945186	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945187	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4945189	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4945190	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945191	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4945192	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4945197	0.91[EUR][1000 genomes]
rs4945202	0.91[EUR][1000 genomes]
rs4945203	0.91[EUR][1000 genomes]
rs4945204	0.91[EUR][1000 genomes]
rs4945205	0.91[EUR][1000 genomes]
rs4945209	0.91[EUR][1000 genomes]
rs4945210	0.91[EUR][1000 genomes]
rs4945211	0.91[EUR][1000 genomes]
rs4945212	0.91[EUR][1000 genomes]
rs4945213	0.91[EUR][1000 genomes]
rs4945214	0.91[EUR][1000 genomes]
rs4945215	0.91[EUR][1000 genomes]
rs4945217	0.87[EUR][1000 genomes]
rs4945218	0.91[EUR][1000 genomes]
rs4945219	0.91[EUR][1000 genomes]
rs55881536	0.91[EUR][1000 genomes]
rs56097222	0.85[EUR][1000 genomes]
rs56175172	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56372481	0.86[EUR][1000 genomes]
rs56817084	0.91[EUR][1000 genomes]
rs57222975	0.91[EUR][1000 genomes]
rs57332020	0.93[EUR][1000 genomes]
rs57362996	0.91[EUR][1000 genomes]
rs57588070	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57687790	0.90[EUR][1000 genomes]
rs57805854	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57935035	0.91[EUR][1000 genomes]
rs58367448	0.91[EUR][1000 genomes]
rs58393579	0.91[EUR][1000 genomes]
rs58395847	0.91[EUR][1000 genomes]
rs58608947	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58720932	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58914857	0.91[EUR][1000 genomes]
rs59191974	0.91[EUR][1000 genomes]
rs59404463	0.91[EUR][1000 genomes]
rs59459776	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59520338	0.91[EUR][1000 genomes]
rs59581090	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59765258	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59832115	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59969402	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59983642	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60132034	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60186049	0.91[EUR][1000 genomes]
rs60842160	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60849458	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60929773	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60948958	0.91[EUR][1000 genomes]
rs61201484	0.91[EUR][1000 genomes]
rs61358482	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61361232	0.91[EUR][1000 genomes]
rs61397357	0.91[EUR][1000 genomes]
rs61468764	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61576111	0.91[EUR][1000 genomes]
rs6592736	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592740	0.90[EUR][1000 genomes]
rs6592742	0.91[EUR][1000 genomes]
rs66472445	0.91[EUR][1000 genomes]
rs66488360	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66504136	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs66622455	0.91[EUR][1000 genomes]
rs66658383	0.91[EUR][1000 genomes]
rs66664368	0.90[EUR][1000 genomes]
rs66675536	0.91[EUR][1000 genomes]
rs66681087	0.91[EUR][1000 genomes]
rs66684353	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66738005	0.91[EUR][1000 genomes]
rs66895426	0.91[EUR][1000 genomes]
rs66924979	0.91[EUR][1000 genomes]
rs66991096	0.91[EUR][1000 genomes]
rs67035387	0.91[EUR][1000 genomes]
rs67062156	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67195676	0.91[EUR][1000 genomes]
rs67200285	0.91[EUR][1000 genomes]
rs67230007	0.91[EUR][1000 genomes]
rs67241586	0.91[EUR][1000 genomes]
rs67291795	0.91[EUR][1000 genomes]
rs67313689	0.91[EUR][1000 genomes]
rs67555375	0.91[EUR][1000 genomes]
rs67606281	0.91[EUR][1000 genomes]
rs67680371	0.91[EUR][1000 genomes]
rs67724005	0.91[EUR][1000 genomes]
rs67736392	0.91[EUR][1000 genomes]
rs67769372	0.91[EUR][1000 genomes]
rs67775318	0.91[EUR][1000 genomes]
rs67807487	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67843465	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67875187	0.91[EUR][1000 genomes]
rs67881763	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs68013767	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs68052959	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs68146267	0.91[EUR][1000 genomes]
rs7104540	0.91[EUR][1000 genomes]
rs7105526	0.91[EUR][1000 genomes]
rs7106113	0.91[EUR][1000 genomes]
rs7106659	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7109199	0.91[EUR][1000 genomes]
rs7109398	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7109527	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7109704	0.91[EUR][1000 genomes]
rs7110322	0.90[EUR][1000 genomes]
rs7110844	0.91[EUR][1000 genomes]
rs7113415	0.91[EUR][1000 genomes]
rs7116671	0.91[EUR][1000 genomes]
rs7118516	0.91[EUR][1000 genomes]
rs7119471	0.91[EUR][1000 genomes]
rs7119665	0.87[EUR][1000 genomes]
rs7119934	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7120465	0.91[EUR][1000 genomes]
rs7123204	0.91[EUR][1000 genomes]
rs7124030	0.91[EUR][1000 genomes]
rs7124116	0.91[EUR][1000 genomes]
rs7124753	0.91[EUR][1000 genomes]
rs7127803	0.91[EUR][1000 genomes]
rs7128881	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs713083	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7131169	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7131298	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs720383	0.91[EUR][1000 genomes]
rs72931818	0.91[EUR][1000 genomes]
rs72931829	0.91[EUR][1000 genomes]
rs72935512	0.90[EUR][1000 genomes]
rs72943487	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72943494	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72943497	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72945524	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72945540	0.81[EUR][1000 genomes]
rs72945566	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72945586	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72947636	0.86[EUR][1000 genomes]
rs72947653	0.91[EUR][1000 genomes]
rs72949614	0.91[EUR][1000 genomes]
rs72949656	0.91[EUR][1000 genomes]
rs73491984	0.91[EUR][1000 genomes]
rs73495923	0.91[EUR][1000 genomes]
rs7482006	0.90[EUR][1000 genomes]
rs7925252	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7930066	0.91[EUR][1000 genomes]
rs7930885	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7930988	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7931215	0.91[EUR][1000 genomes]
rs7932057	0.91[EUR][1000 genomes]
rs7932111	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7932603	0.82[EUR][1000 genomes]
rs7933197	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7936904	0.91[EUR][1000 genomes]
rs7937983	0.91[EUR][1000 genomes]
rs7939623	0.91[EUR][1000 genomes]
rs7941418	0.91[EUR][1000 genomes]
rs7942838	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7947430	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7947859	0.87[EUR][1000 genomes]
rs7950612	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7950631	0.91[EUR][1000 genomes]
rs7951172	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048360	chr11:76900813-77387933	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv541089	chr11:76900813-77387933	Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
3	nsv1049603	chr11:76900813-77520411	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv541090	chr11:76900813-77520411	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv1038974	chr11:77284036-77431228	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
6	nsv1041384	chr11:77284558-77419809	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
7	nsv1048892	chr11:77290458-77431228	Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
8	nsv1053074	chr11:77290458-77435831	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
9	nsv468641	chr11:77301341-77420314	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
10	nsv555452	chr11:77301341-77420314	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
11	nsv1035494	chr11:77309696-77431228	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs11822592	RP11-91P24.6	cis	Artery Tibial	GTEx
rs11822592	AAMDC	cis	Thyroid	GTEx
rs11822592	RP11-91P24.7	cis	Artery Tibial	GTEx
rs11822592	RSF1	Cis_1M	lymphoblastoid	RTeQTL
rs11822592	AAMDC	cis	Artery Tibial	GTEx
rs11822592	INTS4	Cis_1M	lymphoblastoid	RTeQTL
rs11822592	RP11-91P24.6	cis	Thyroid	GTEx

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:77301400-77346000	Weak transcription	Small Intestine	intestine
2	chr11:77301600-77332800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:77301800-77326600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr11:77301800-77332200	Weak transcription	Esophagus	oesophagus
5	chr11:77301800-77345800	Weak transcription	Spleen	Spleen
6	chr11:77305600-77326000	Weak transcription	Primary B cells from cord blood	blood
7	chr11:77310800-77329200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr11:77311600-77327200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr11:77313000-77327200	Weak transcription	Psoas Muscle	Psoas
10	chr11:77313000-77345200	Weak transcription	Gastric	stomach
11	chr11:77313000-77347400	Weak transcription	Colonic Mucosa	Colon
12	chr11:77313200-77330400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr11:77313400-77327800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr11:77314000-77325800	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr11:77314000-77330400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr11:77314000-77345800	Weak transcription	Pancreas	Pancrea
17	chr11:77314000-77347400	Weak transcription	Fetal Heart	heart
18	chr11:77314200-77327200	Weak transcription	Brain Hippocampus Middle	brain
19	chr11:77314200-77329200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr11:77314200-77329400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
21	chr11:77315000-77330800	Strong transcription	Liver	Liver
22	chr11:77315000-77341800	Strong transcription	HUES64 Cell Line	embryonic stem cell
23	chr11:77315200-77341400	Strong transcription	Primary monocytes fromperipheralblood	blood
24	chr11:77315600-77341000	Strong transcription	Monocytes-CD14+_RO01746	blood
25	chr11:77315800-77331600	Strong transcription	A549	lung
26	chr11:77316000-77326600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr11:77316400-77338400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr11:77316400-77341400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr11:77316400-77346800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr11:77316600-77337200	Strong transcription	HUES6 Cell Line	embryonic stem cell
31	chr11:77316600-77344200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
32	chr11:77316600-77347000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr11:77317000-77326200	Weak transcription	Primary neutrophils fromperipheralblood	blood
34	chr11:77317000-77337400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr11:77317200-77330600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr11:77317200-77336800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
37	chr11:77317200-77337400	Strong transcription	Fetal Thymus	thymus
38	chr11:77317400-77328400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr11:77317400-77331600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
40	chr11:77317400-77340200	Strong transcription	Primary T helper cells fromperipheralblood	blood
41	chr11:77317400-77340400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr11:77317600-77327200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr11:77317600-77330800	Strong transcription	Fetal Intestine Large	intestine
44	chr11:77317600-77337600	Strong transcription	Dnd41	blood
45	chr11:77318000-77337000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
46	chr11:77319400-77331000	Strong transcription	H1 Cell Line	embryonic stem cell
47	chr11:77320000-77325800	Weak transcription	NH-A	brain
48	chr11:77320000-77326600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr11:77320400-77328000	Strong transcription	Primary hematopoietic stem cells	blood
50	chr11:77320400-77328200	Strong transcription	K562	blood

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