Variant report

Variant	rs4944176
Chromosome Location	chr11:77552987-77552988
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 226 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:222)

rs_ID	r²[population]
rs10676933	0.87[EUR][1000 genomes]
rs11237271	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11237274	0.80[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1124590	0.89[CEU][hapmap];0.92[YRI][hapmap]
rs11822592	0.90[EUR][1000 genomes]
rs11823751	0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11824150	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11825573	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11827357	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11828664	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12417232	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12417488	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12417760	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12417823	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12418152	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12418476	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12418551	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12418559	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[YRI][hapmap];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12418734	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12418844	0.81[CEU][hapmap];0.84[CHB][hapmap];0.81[JPT][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12419685	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12419883	0.80[YRI][hapmap]
rs12420092	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12420290	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12420401	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12420528	0.90[YRI][hapmap]
rs12421391	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12421699	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12574507	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12574999	0.90[EUR][1000 genomes]
rs12575014	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12575150	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12577951	0.83[ASW][hapmap];0.89[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.91[TSI][hapmap];0.92[YRI][hapmap]
rs12806790	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1540179	0.90[EUR][1000 genomes]
rs1544272	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1544273	0.81[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1544274	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17135800	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17135807	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.92[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17135809	0.83[ASW][hapmap];0.81[CEU][hapmap];0.87[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17135811	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17135905	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17135969	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1892868	1.00[YRI][hapmap]
rs1892869	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1893901	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1986474	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.92[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2032415	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2051484	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2154973	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2154988	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2186564	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.85[MKK][hapmap];0.92[TSI][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2186573	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2298820	0.81[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28610388	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28930682	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34446294	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35546645	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35774637	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3758664	0.82[EUR][1000 genomes]
rs3781616	0.91[EUR][1000 genomes]
rs3781617	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3819211	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3886195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3949117	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4245454	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4245455	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4269952	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4448713	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4491258	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4531493	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4578411	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4944173	0.91[EUR][1000 genomes]
rs4944175	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4944178	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];0.93[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945189	0.90[EUR][1000 genomes]
rs4945190	0.90[EUR][1000 genomes]
rs4945191	0.90[EUR][1000 genomes]
rs4945192	0.91[EUR][1000 genomes]
rs4945197	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4945202	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4945203	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4945204	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4945205	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4945209	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945210	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945211	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945212	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945213	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945214	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945215	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945217	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945218	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4945219	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4945223	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55881536	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56097222	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56372481	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56817084	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57222975	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57332020	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57362996	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57687790	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57935035	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58020660	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58367448	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58393579	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58395847	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58914857	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59191974	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59239088	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59363412	0.80[EUR][1000 genomes]
rs59404463	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59459776	0.90[EUR][1000 genomes]
rs59520338	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs59765258	0.91[EUR][1000 genomes]
rs59832115	0.90[EUR][1000 genomes]
rs60143695	0.80[EUR][1000 genomes]
rs60186049	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60208812	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60509203	0.80[EUR][1000 genomes]
rs608539	0.81[CHB][hapmap]
rs60929773	0.91[EUR][1000 genomes]
rs60948958	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61201484	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61358482	0.90[EUR][1000 genomes]
rs61361232	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61397357	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61468764	0.90[EUR][1000 genomes]
rs61576111	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61605540	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592740	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6592742	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66472445	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66488360	0.91[EUR][1000 genomes]
rs66622455	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66658383	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs66664368	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66675536	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66681087	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66684353	0.91[EUR][1000 genomes]
rs667213	0.81[CHB][hapmap]
rs66738005	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66895426	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs66924979	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66991096	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67035387	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67195676	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs67200285	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67230007	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67241586	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67291795	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67313689	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67555375	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67606281	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67680371	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67724005	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67736392	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67769372	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67775318	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67807487	0.90[EUR][1000 genomes]
rs67875187	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67881763	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs68013767	0.91[EUR][1000 genomes]
rs68146267	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7104540	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7105526	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7106113	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7109199	0.80[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7109527	0.91[EUR][1000 genomes]
rs7109704	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7110322	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7110844	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7113415	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7116671	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7118516	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7119471	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7119665	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7120465	0.85[CHB][hapmap];0.82[JPT][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7123204	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7124030	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7124116	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7124753	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7126909	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7127803	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7128881	0.91[EUR][1000 genomes]
rs7131169	0.90[EUR][1000 genomes]
rs7131298	0.90[EUR][1000 genomes]
rs720383	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72931818	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72931829	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72935512	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72939439	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72939448	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72939452	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72939456	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72945586	0.91[EUR][1000 genomes]
rs72947606	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72947636	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72947653	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72949614	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72949656	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73491984	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73495923	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7482006	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7925252	0.88[EUR][1000 genomes]
rs7930066	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7931215	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7932057	0.81[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7935050	0.80[YRI][hapmap]
rs7936904	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7937983	0.81[CEU][hapmap];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7939623	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7941418	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7942838	0.87[EUR][1000 genomes]
rs7946876	0.82[ASW][hapmap];0.90[GIH][hapmap];0.86[MEX][hapmap];0.85[YRI][hapmap]
rs7947859	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7950631	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7951172	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9667816	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9667819	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050891	chr11:77416645-77788002	Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
2	nsv1037292	chr11:77431583-77745934	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	nsv541092	chr11:77431583-77745934	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
4	nsv949316	chr11:77454076-77769885	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs4944176	RP11-91P24.7	cis	Artery Tibial	GTEx
rs4944176	RP11-91P24.6	cis	Thyroid	GTEx
rs4944176	RP11-91P24.7	cis	Thyroid	GTEx
rs4944176	AAMDC	cis	Thyroid	GTEx
rs4944176	INTS4	Cis_1M	lymphoblastoid	RTeQTL
rs4944176	CLNS1A	cis	cerebellum	SCAN
rs4944176	RP11-91P24.6	cis	Artery Tibial	GTEx
rs4944176	AAMDC	cis	Artery Tibial	GTEx
rs4944176	RSF1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:77533000-77553800	Weak transcription	Brain Angular Gyrus	brain
2	chr11:77533000-77554000	Weak transcription	Brain Substantia Nigra	brain
3	chr11:77533000-77554200	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr11:77533400-77553800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr11:77533400-77554000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:77533400-77565600	Weak transcription	Gastric	stomach
7	chr11:77533400-77565600	Weak transcription	Pancreas	Pancrea
8	chr11:77533600-77553000	Weak transcription	HUVEC	blood vessel
9	chr11:77534600-77555400	Weak transcription	Lung	lung
10	chr11:77535200-77553800	Weak transcription	NHDF-Ad	bronchial
11	chr11:77535200-77554200	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr11:77535200-77554400	Weak transcription	HSMM	muscle
13	chr11:77535400-77553400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr11:77535400-77553400	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr11:77535400-77554200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr11:77535400-77555000	Weak transcription	Rectal Smooth Muscle	rectum
17	chr11:77535400-77565600	Weak transcription	HepG2	liver
18	chr11:77541600-77553800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr11:77544600-77555400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr11:77544600-77564400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr11:77544600-77565400	Weak transcription	Spleen	Spleen
22	chr11:77544800-77553400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr11:77544800-77554200	Weak transcription	Duodenum Mucosa	Duodenum
24	chr11:77544800-77554200	Weak transcription	Dnd41	blood
25	chr11:77544800-77554400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr11:77544800-77564400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr11:77544800-77565400	Weak transcription	Pancreatic Islets	Pancreatic Islet
28	chr11:77545000-77554000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr11:77545000-77555400	Weak transcription	Fetal Kidney	kidney
30	chr11:77547200-77565800	Weak transcription	Fetal Heart	heart
31	chr11:77547600-77555200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr11:77548800-77582800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
33	chr11:77549000-77553400	Weak transcription	NH-A	brain
34	chr11:77550000-77565600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr11:77550200-77553000	Weak transcription	Osteobl	bone
36	chr11:77550200-77553400	Weak transcription	Primary T cells from cord blood	blood
37	chr11:77550200-77554000	Weak transcription	Brain Anterior Caudate	brain
38	chr11:77550400-77554200	Weak transcription	HSMMtube	muscle
39	chr11:77550400-77557200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr11:77550800-77554200	Weak transcription	Rectal Mucosa Donor 29	rectum
41	chr11:77550800-77564000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
42	chr11:77550800-77565400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr11:77551000-77555400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr11:77551200-77558400	Weak transcription	Rectal Mucosa Donor 31	rectum
45	chr11:77551400-77565400	Weak transcription	Fetal Thymus	thymus
46	chr11:77551600-77553000	ZNF genes & repeats	Fetal Intestine Small	intestine
47	chr11:77551800-77556600	Strong transcription	Ovary	ovary
48	chr11:77552000-77553000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr11:77552000-77553800	Weak transcription	HUES64 Cell Line	embryonic stem cell
50	chr11:77552000-77555400	Strong transcription	Fetal Intestine Large	intestine

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