The 2.0 version of rSNPBase

Variant report

Variant rs72931818
Chromosome Location chr11:77496172-77496173
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:77442800-77500200 Weak transcription Pancreas Pancrea
2 chr11:77443200-77500200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr11:77459400-77498200 Weak transcription NHEK skin
4 chr11:77462200-77500200 Weak transcription Gastric stomach
5 chr11:77463800-77527000 Weak transcription Aorta Aorta
6 chr11:77465200-77500200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr11:77467000-77500200 Weak transcription Esophagus oesophagus
8 chr11:77475200-77498000 Weak transcription HMEC breast
9 chr11:77475200-77501600 Weak transcription Brain Germinal Matrix brain
10 chr11:77475200-77502600 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr11:77475200-77527800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr11:77475400-77500400 Weak transcription Lung lung
13 chr11:77475400-77500600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr11:77475400-77501800 Weak transcription Thymus Thymus
15 chr11:77475400-77502400 Weak transcription Fetal Muscle Leg muscle
16 chr11:77475400-77504200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:77475400-77522000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr11:77475400-77529000 Weak transcription NHLF lung
19 chr11:77475400-77530000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr11:77475600-77498000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr11:77475600-77498200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr11:77475600-77500200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr11:77475600-77511600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr11:77475600-77511600 Weak transcription Stomach Smooth Muscle stomach
25 chr11:77475800-77510400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr11:77475800-77522000 Weak transcription Hela-S3 cervix
27 chr11:77478600-77498600 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr11:77482600-77500200 Weak transcription Right Ventricle heart
29 chr11:77482600-77509800 Weak transcription Adipose Nuclei Adipose
30 chr11:77482800-77501800 Weak transcription Duodenum Mucosa Duodenum
31 chr11:77482800-77525800 Weak transcription Fetal Lung lung
32 chr11:77483600-77498800 Weak transcription Primary hematopoietic stem cells blood
33 chr11:77483800-77499000 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr11:77484400-77497600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr11:77486600-77500000 Weak transcription Primary T cells fromperipheralblood blood
36 chr11:77487000-77499600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr11:77487200-77497800 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr11:77487200-77500200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr11:77487200-77500200 Weak transcription Fetal Stomach stomach
40 chr11:77487200-77500200 Weak transcription Ovary ovary
41 chr11:77487200-77500400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:77487200-77500400 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr11:77487200-77501600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr11:77487200-77503200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr11:77487400-77503000 Weak transcription Dnd41 blood
46 chr11:77487400-77522000 Weak transcription Placenta Placenta
47 chr11:77489800-77503400 Weak transcription A549 lung
48 chr11:77489800-77511600 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr11:77490000-77498400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr11:77490000-77498600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015