Variant report

Variant	rs7947859
Chromosome Location	chr11:77510547-77510548
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 249 )
Associated
traits (count: 7 )

rSNPs within LD-proxies of this variant (count:243)

rs_ID	r²[population]
rs10676933	0.84[EUR][1000 genomes]
rs11237234	0.87[EUR][1000 genomes]
rs11237271	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11237274	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11822592	0.87[EUR][1000 genomes]
rs11823751	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11824150	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11825573	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11827357	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11828664	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12417215	0.80[EUR][1000 genomes]
rs12417232	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12417488	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12417760	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12417823	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12418152	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12418476	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12418551	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12418559	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12418734	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12418844	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12419685	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12420021	0.80[EUR][1000 genomes]
rs12420092	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12420290	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12420401	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12421391	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12421695	0.80[EUR][1000 genomes]
rs12421699	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12574507	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12574660	0.80[EUR][1000 genomes]
rs12574999	0.87[EUR][1000 genomes]
rs12575014	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12575150	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12577552	0.86[EUR][1000 genomes]
rs12806790	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1540179	0.87[EUR][1000 genomes]
rs1544272	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1544273	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1544274	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135800	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135807	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135809	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135811	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135905	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135969	0.84[EUR][1000 genomes]
rs1892869	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1893901	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1945751	0.80[EUR][1000 genomes]
rs1986474	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2032415	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2051484	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2154973	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2154988	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2186564	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2186573	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2276415	0.80[EUR][1000 genomes]
rs2276416	0.80[EUR][1000 genomes]
rs2298820	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28421376	0.87[EUR][1000 genomes]
rs28610388	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28730304	0.87[EUR][1000 genomes]
rs28930682	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34446294	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35546645	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35774637	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3781616	0.88[EUR][1000 genomes]
rs3781617	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3819211	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3886195	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3949117	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4245454	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4245455	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4269952	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4448713	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4491258	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4531493	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4578411	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4944169	0.88[EUR][1000 genomes]
rs4944170	0.87[EUR][1000 genomes]
rs4944171	0.88[EUR][1000 genomes]
rs4944173	0.88[EUR][1000 genomes]
rs4944175	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4944176	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4944178	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4945186	0.83[EUR][1000 genomes]
rs4945187	0.88[EUR][1000 genomes]
rs4945189	0.87[EUR][1000 genomes]
rs4945190	0.87[EUR][1000 genomes]
rs4945191	0.87[EUR][1000 genomes]
rs4945192	0.88[EUR][1000 genomes]
rs4945197	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945202	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945203	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945204	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945205	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945209	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945210	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945211	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945212	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945213	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945214	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945215	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945217	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945218	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4945219	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4945223	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs55881536	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56097222	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56372481	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56817084	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57222975	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57332020	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57362996	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57588070	0.80[EUR][1000 genomes]
rs57687790	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57805854	0.88[EUR][1000 genomes]
rs57935035	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58020660	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58367448	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58393579	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58395847	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58608947	0.88[EUR][1000 genomes]
rs58720932	0.88[EUR][1000 genomes]
rs58914857	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59191974	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59239088	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs59404463	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59459776	0.87[EUR][1000 genomes]
rs59520338	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59765258	0.88[EUR][1000 genomes]
rs59832115	0.87[EUR][1000 genomes]
rs59969402	0.88[EUR][1000 genomes]
rs59983642	0.80[EUR][1000 genomes]
rs60132034	0.88[EUR][1000 genomes]
rs60186049	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60208812	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60849458	0.80[EUR][1000 genomes]
rs60929773	0.88[EUR][1000 genomes]
rs60948958	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61201484	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61358482	0.87[EUR][1000 genomes]
rs61361232	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61397357	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61468764	0.87[EUR][1000 genomes]
rs61576111	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61605540	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6592736	0.84[EUR][1000 genomes]
rs6592740	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592742	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66472445	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66488360	0.88[EUR][1000 genomes]
rs66504136	0.88[EUR][1000 genomes]
rs66622455	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs66658383	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs66664368	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66675536	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66681087	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66684353	0.88[EUR][1000 genomes]
rs66738005	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66895426	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs66924979	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66991096	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67035387	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67195676	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67200285	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67230007	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67241586	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67291795	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67313689	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67555375	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67606281	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67680371	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67724005	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67736392	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs67769372	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67775318	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67807487	0.87[EUR][1000 genomes]
rs67843465	0.80[EUR][1000 genomes]
rs67875187	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67881763	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs68013767	0.88[EUR][1000 genomes]
rs68146267	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7104540	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7105526	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7106113	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7106659	0.83[EUR][1000 genomes]
rs7109199	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7109398	0.87[EUR][1000 genomes]
rs7109527	0.88[EUR][1000 genomes]
rs7109704	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7110322	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7110844	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7113415	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7116671	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7118516	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7119471	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7119665	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7120465	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7123204	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7124030	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7124116	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7124753	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7126909	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7127803	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7128881	0.88[EUR][1000 genomes]
rs713083	0.87[EUR][1000 genomes]
rs7131169	0.87[EUR][1000 genomes]
rs7131298	0.87[EUR][1000 genomes]
rs720383	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72931818	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72931829	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72935512	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72939439	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72939448	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72939452	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72939456	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72945566	0.88[EUR][1000 genomes]
rs72945586	0.88[EUR][1000 genomes]
rs72947606	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72947636	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72947653	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72949614	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72949656	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73491984	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73495923	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7482006	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7925252	0.86[EUR][1000 genomes]
rs7930066	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7930885	0.88[EUR][1000 genomes]
rs7930988	0.87[EUR][1000 genomes]
rs7931215	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7932057	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7936904	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7937983	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7939623	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7941418	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7942838	0.84[EUR][1000 genomes]
rs7947430	0.80[EUR][1000 genomes]
rs7950631	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7951172	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9667816	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9667819	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049603	chr11:76900813-77520411	Strong transcription Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv541090	chr11:76900813-77520411	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
3	nsv1050891	chr11:77416645-77788002	Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
4	nsv1037292	chr11:77431583-77745934	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
5	nsv541092	chr11:77431583-77745934	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
6	nsv949316	chr11:77454076-77769885	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs7947859	RP11-91P24.6	cis	Thyroid	GTEx
rs7947859	AAMDC	cis	Thyroid	GTEx
rs7947859	RP11-91P24.7	cis	Artery Tibial	GTEx
rs7947859	RP11-91P24.6	cis	Artery Tibial	GTEx
rs7947859	RSF1	Cis_1M	lymphoblastoid	RTeQTL
rs7947859	INTS4	Cis_1M	lymphoblastoid	RTeQTL
rs7947859	AAMDC	cis	Artery Tibial	GTEx

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:77463800-77527000	Weak transcription	Aorta	Aorta
2	chr11:77475200-77527800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:77475400-77522000	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr11:77475400-77529000	Weak transcription	NHLF	lung
5	chr11:77475400-77530000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:77475600-77511600	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr11:77475600-77511600	Weak transcription	Stomach Smooth Muscle	stomach
8	chr11:77475800-77522000	Weak transcription	Hela-S3	cervix
9	chr11:77482800-77525800	Weak transcription	Fetal Lung	lung
10	chr11:77487400-77522000	Weak transcription	Placenta	Placenta
11	chr11:77489800-77511600	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr11:77491400-77517600	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr11:77495800-77528200	Weak transcription	Brain Cingulate Gyrus	brain
14	chr11:77496000-77530200	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr11:77499000-77525600	Weak transcription	HMEC	breast
16	chr11:77499200-77511600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr11:77499200-77513800	Weak transcription	NHEK	skin
18	chr11:77500000-77511400	Weak transcription	Fetal Heart	heart
19	chr11:77500400-77512200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr11:77500800-77511600	Weak transcription	Brain Anterior Caudate	brain
21	chr11:77500800-77511600	Weak transcription	Psoas Muscle	Psoas
22	chr11:77501200-77511400	Weak transcription	Spleen	Spleen
23	chr11:77501200-77525800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr11:77501400-77521600	Weak transcription	Fetal Kidney	kidney
25	chr11:77501400-77526800	Weak transcription	Rectal Smooth Muscle	rectum
26	chr11:77501600-77511000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr11:77502000-77516800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr11:77502200-77511000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr11:77502400-77515200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr11:77503400-77525800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr11:77503600-77511000	Weak transcription	Gastric	stomach
32	chr11:77503600-77511200	Weak transcription	Esophagus	oesophagus
33	chr11:77503600-77511600	Weak transcription	Lung	lung
34	chr11:77503600-77525000	Weak transcription	Ovary	ovary
35	chr11:77503600-77529600	Weak transcription	Right Ventricle	heart
36	chr11:77503800-77521200	Weak transcription	Fetal Thymus	thymus
37	chr11:77503800-77525800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr11:77504000-77521800	Weak transcription	HUES64 Cell Line	embryonic stem cell
39	chr11:77504000-77524400	Weak transcription	Fetal Muscle Trunk	muscle
40	chr11:77504800-77511600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr11:77504800-77511600	Weak transcription	Skeletal Muscle Female	skeletal muscle
42	chr11:77504800-77514000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
43	chr11:77504800-77524600	Weak transcription	Fetal Intestine Large	intestine
44	chr11:77504800-77525200	Weak transcription	Cortex derived primary cultured neurospheres	brain
45	chr11:77505000-77510800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr11:77505000-77511400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr11:77505000-77511600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr11:77505000-77511600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
49	chr11:77505000-77511600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr11:77505000-77511600	Weak transcription	Right Atrium	heart

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