Variant report

Variant	rs7937983
Chromosome Location	chr11:77534355-77534356
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:77532998..77535341-chr11:77537049..77538948,2	K562	blood:
2	chr11:77531990..77533560-chr11:77533743..77535369,2	K562	blood:
3	chr11:77528468..77531025-chr11:77533622..77535888,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000087884	Chromatin interaction
ENSG00000048649	Chromatin interaction

Extended variants
information (count: 235 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:231)

rs_ID	r²[population]
rs10676933	0.88[EUR][1000 genomes]
rs11237234	0.91[EUR][1000 genomes]
rs11237271	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11237274	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11822592	0.91[EUR][1000 genomes]
rs11823751	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11824150	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11825573	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11827357	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11828664	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12417232	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12417488	1.00[CEU][hapmap];0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12417760	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12417823	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12418152	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12418476	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12418551	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12418559	0.83[CEU][hapmap];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12418734	0.81[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12418844	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12419685	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12420092	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12420290	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12420401	1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12421391	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12421699	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12574507	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12574999	0.91[EUR][1000 genomes]
rs12575014	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12575150	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12575197	0.83[CEU][hapmap]
rs12806790	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1540179	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs1544272	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1544273	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1544274	0.81[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135800	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135807	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135809	0.81[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135811	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17135905	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17135969	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs1892869	1.00[CEU][hapmap];0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1893901	1.00[CEU][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1986474	0.81[CEU][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2032415	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2051484	0.81[CEU][hapmap];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2154973	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2154988	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2186564	0.81[CEU][hapmap];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2186573	1.00[CEU][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2298820	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28421376	0.91[EUR][1000 genomes]
rs28610388	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28730304	0.91[EUR][1000 genomes]
rs28930682	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34446294	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35546645	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35774637	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3758664	0.80[EUR][1000 genomes]
rs3781616	0.93[EUR][1000 genomes]
rs3781617	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3819211	0.81[CEU][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3886195	0.83[CEU][hapmap];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3949117	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4245454	0.83[CEU][hapmap];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4245455	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4269952	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4448713	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4491258	0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4531493	1.00[CEU][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4578411	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4944169	0.93[EUR][1000 genomes]
rs4944170	0.91[EUR][1000 genomes]
rs4944171	0.93[EUR][1000 genomes]
rs4944173	0.93[EUR][1000 genomes]
rs4944175	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4944176	0.81[CEU][hapmap];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4944178	0.81[CEU][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945186	0.87[EUR][1000 genomes]
rs4945187	0.93[EUR][1000 genomes]
rs4945189	0.91[EUR][1000 genomes]
rs4945190	0.91[EUR][1000 genomes]
rs4945191	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs4945192	0.93[EUR][1000 genomes]
rs4945197	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4945202	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945203	1.00[CEU][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4945204	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945205	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4945209	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945210	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945211	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945212	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945213	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945214	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945215	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945217	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4945218	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4945219	1.00[CEU][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4945223	0.83[CEU][hapmap];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55881536	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56097222	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56372481	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56817084	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57222975	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57332020	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57362996	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57687790	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57805854	0.93[EUR][1000 genomes]
rs57935035	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58020660	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58367448	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58393579	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58395847	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58608947	0.93[EUR][1000 genomes]
rs58720932	0.93[EUR][1000 genomes]
rs58914857	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59191974	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59239088	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59404463	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59459776	0.91[EUR][1000 genomes]
rs59520338	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59765258	0.93[EUR][1000 genomes]
rs59832115	0.91[EUR][1000 genomes]
rs59969402	0.93[EUR][1000 genomes]
rs60132034	0.93[EUR][1000 genomes]
rs60186049	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60208812	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60929773	0.93[EUR][1000 genomes]
rs60948958	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61201484	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61358482	0.91[EUR][1000 genomes]
rs61361232	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61397357	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61468764	0.91[EUR][1000 genomes]
rs61576111	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61605540	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592740	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592742	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66472445	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66488360	0.93[EUR][1000 genomes]
rs66504136	0.93[EUR][1000 genomes]
rs66622455	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66658383	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs66664368	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66675536	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66681087	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66684353	0.93[EUR][1000 genomes]
rs66738005	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66895426	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs66924979	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66991096	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67035387	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67195676	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs67200285	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67230007	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67241586	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67291795	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67313689	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67555375	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67606281	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67680371	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67724005	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67736392	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs67769372	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67775318	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs67807487	0.91[EUR][1000 genomes]
rs67875187	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67881763	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs68013767	0.93[EUR][1000 genomes]
rs68146267	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7104540	1.00[CEU][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7105526	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7106113	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7106659	0.87[EUR][1000 genomes]
rs7109199	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7109398	0.91[EUR][1000 genomes]
rs7109527	0.81[CEU][hapmap];0.93[EUR][1000 genomes]
rs7109704	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7110322	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7110844	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7113415	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7116671	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7118516	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7119471	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7119665	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7120465	0.91[CEU][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7123204	1.00[CEU][hapmap];0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7124030	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7124116	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7124753	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7126909	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7127803	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7128881	0.83[CEU][hapmap];0.93[EUR][1000 genomes]
rs713083	0.91[EUR][1000 genomes]
rs7131169	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs7131298	0.91[CEU][hapmap];0.91[EUR][1000 genomes]
rs720383	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72931818	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72931829	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72935512	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72939439	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72939448	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72939452	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72939456	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72945566	0.93[EUR][1000 genomes]
rs72945586	0.93[EUR][1000 genomes]
rs72947606	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72947636	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72947653	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72949614	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72949656	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73491984	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73495923	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7482006	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7925252	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs7930066	1.00[CEU][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7930885	0.93[EUR][1000 genomes]
rs7930988	0.91[EUR][1000 genomes]
rs7931215	1.00[CEU][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7932057	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7936904	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7939623	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7941418	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7942838	0.88[EUR][1000 genomes]
rs7947859	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7950631	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7951172	1.00[CEU][hapmap];0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9667816	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9667819	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050891	chr11:77416645-77788002	Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
2	nsv1037292	chr11:77431583-77745934	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	nsv541092	chr11:77431583-77745934	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
4	nsv949316	chr11:77454076-77769885	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs7937983	RSF1	Cis_1M	lymphoblastoid	RTeQTL
rs7937983	AAMDC	cis	Artery Tibial	GTEx
rs7937983	INTS4	Cis_1M	lymphoblastoid	RTeQTL
rs7937983	RP11-91P24.7	cis	Artery Tibial	GTEx
rs7937983	RP11-91P24.6	cis	Thyroid	GTEx
rs7937983	AAMDC	cis	Thyroid	GTEx
rs7937983	C11orf67	cis	normal skin	skin_eQTL
rs7937983	RP11-91P24.6	cis	Artery Tibial	GTEx

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:77530000-77534400	Active TSS	A549	lung
2	chr11:77532600-77534600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr11:77533000-77534400	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr11:77533000-77534400	Weak transcription	Placenta	Placenta
5	chr11:77533000-77534400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr11:77533000-77534600	Weak transcription	Aorta	Aorta
7	chr11:77533000-77534800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr11:77533000-77534800	Weak transcription	Brain Anterior Caudate	brain
9	chr11:77533000-77535000	Enhancers	Fetal Heart	heart
10	chr11:77533000-77537600	Weak transcription	Thymus	Thymus
11	chr11:77533000-77544400	Weak transcription	Primary B cells from cord blood	blood
12	chr11:77533000-77553800	Weak transcription	Brain Angular Gyrus	brain
13	chr11:77533000-77554000	Weak transcription	Brain Substantia Nigra	brain
14	chr11:77533000-77554200	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr11:77533200-77534400	Weak transcription	HSMMtube	muscle
16	chr11:77533200-77535400	Enhancers	Liver	Liver
17	chr11:77533400-77534400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr11:77533400-77534400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr11:77533400-77534400	Weak transcription	Colon Smooth Muscle	Colon
20	chr11:77533400-77534400	Weak transcription	Duodenum Mucosa	Duodenum
21	chr11:77533400-77534400	Weak transcription	Fetal Intestine Large	intestine
22	chr11:77533400-77534400	Weak transcription	Fetal Muscle Leg	muscle
23	chr11:77533400-77534400	Weak transcription	Psoas Muscle	Psoas
24	chr11:77533400-77534400	Weak transcription	Right Atrium	heart
25	chr11:77533400-77534400	Weak transcription	Stomach Mucosa	stomach
26	chr11:77533400-77534400	Weak transcription	K562	blood
27	chr11:77533400-77534600	Weak transcription	Fetal Kidney	kidney
28	chr11:77533400-77534800	Weak transcription	HSMM	muscle
29	chr11:77533400-77535000	Enhancers	Fetal Lung	lung
30	chr11:77533400-77535000	Weak transcription	Stomach Smooth Muscle	stomach
31	chr11:77533400-77535000	Weak transcription	Hela-S3	cervix
32	chr11:77533400-77535000	Weak transcription	NHDF-Ad	bronchial
33	chr11:77533400-77535400	Enhancers	Osteobl	bone
34	chr11:77533400-77535600	Weak transcription	Right Ventricle	heart
35	chr11:77533400-77552200	Weak transcription	Brain Hippocampus Middle	brain
36	chr11:77533400-77552200	Weak transcription	Left Ventricle	heart
37	chr11:77533400-77553800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr11:77533400-77554000	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr11:77533400-77565600	Weak transcription	Gastric	stomach
40	chr11:77533400-77565600	Weak transcription	Pancreas	Pancrea
41	chr11:77533600-77534400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr11:77533600-77534400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr11:77533600-77534400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr11:77533600-77534400	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr11:77533600-77534400	Weak transcription	NHLF	lung
46	chr11:77533600-77534600	Weak transcription	Primary hematopoietic stem cells	blood
47	chr11:77533600-77534800	Weak transcription	Muscle Satellite Cultured Cells	--
48	chr11:77533600-77534800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr11:77533600-77535200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
50	chr11:77533600-77535400	Enhancers	Rectal Smooth Muscle	rectum

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