The 2.0 version of rSNPBase

Variant report

Variant rs4945214
Chromosome Location chr11:77502470-77502471
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:77463800-77527000 Weak transcription Aorta Aorta
2 chr11:77475200-77502600 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr11:77475200-77527800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr11:77475400-77504200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr11:77475400-77522000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr11:77475400-77529000 Weak transcription NHLF lung
7 chr11:77475400-77530000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr11:77475600-77511600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr11:77475600-77511600 Weak transcription Stomach Smooth Muscle stomach
10 chr11:77475800-77510400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr11:77475800-77522000 Weak transcription Hela-S3 cervix
12 chr11:77482600-77509800 Weak transcription Adipose Nuclei Adipose
13 chr11:77482800-77525800 Weak transcription Fetal Lung lung
14 chr11:77487200-77503200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr11:77487400-77503000 Weak transcription Dnd41 blood
16 chr11:77487400-77522000 Weak transcription Placenta Placenta
17 chr11:77489800-77503400 Weak transcription A549 lung
18 chr11:77489800-77511600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr11:77491400-77517600 Weak transcription Muscle Satellite Cultured Cells --
20 chr11:77494600-77503000 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr11:77495800-77528200 Weak transcription Brain Cingulate Gyrus brain
22 chr11:77496000-77530200 Weak transcription H9 Cell Line embryonic stem cell
23 chr11:77496200-77503400 Weak transcription Primary B cells from cord blood blood
24 chr11:77496400-77503400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr11:77497200-77506200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr11:77498000-77504600 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr11:77498800-77504000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr11:77498800-77504000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr11:77498800-77510200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr11:77499000-77525600 Weak transcription HMEC breast
31 chr11:77499200-77506000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr11:77499200-77511600 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr11:77499200-77513800 Weak transcription NHEK skin
34 chr11:77500000-77511400 Weak transcription Fetal Heart heart
35 chr11:77500200-77502600 Weak transcription Primary T cells from cord blood blood
36 chr11:77500200-77505800 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr11:77500400-77505400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr11:77500400-77512200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr11:77500600-77503200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:77500600-77503400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr11:77500600-77505200 Weak transcription Small Intestine intestine
42 chr11:77500800-77503400 Weak transcription Right Atrium heart
43 chr11:77500800-77504800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:77500800-77505600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:77500800-77505600 ZNF genes & repeats Fetal Intestine Small intestine
46 chr11:77500800-77511600 Weak transcription Brain Anterior Caudate brain
47 chr11:77500800-77511600 Weak transcription Psoas Muscle Psoas
48 chr11:77501000-77503000 Weak transcription Ovary ovary
49 chr11:77501000-77503000 Weak transcription Right Ventricle heart
50 chr11:77501000-77503200 Weak transcription Gastric stomach

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Last update: Aug 31, 2015