Variant report

Variant rs12418551
Chromosome Location chr11:77565877-77565878
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:77548800-77582800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr11:77556600-77566000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr11:77560800-77568400 Strong transcription Skeletal Muscle Female skeletal muscle
4 chr11:77562600-77568000 ZNF genes & repeats Primary hematopoietic stem cells blood
5 chr11:77563000-77567600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr11:77563000-77569000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
7 chr11:77563400-77568400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr11:77563400-77568400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr11:77563600-77568400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
10 chr11:77564000-77568400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
11 chr11:77564200-77566600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
12 chr11:77564200-77567200 ZNF genes & repeats Fetal Intestine Small intestine
13 chr11:77564200-77567400 ZNF genes & repeats Fetal Intestine Large intestine
14 chr11:77564400-77566200 ZNF genes & repeats H1 Cell Line embryonic stem cell
15 chr11:77564400-77566400 ZNF genes & repeats Dnd41 blood
16 chr11:77564400-77566800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
17 chr11:77564400-77567400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:77564400-77567800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:77564400-77568000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr11:77564400-77568400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr11:77564400-77568400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr11:77564600-77567600 ZNF genes & repeats Brain Germinal Matrix brain
23 chr11:77565000-77566200 Strong transcription Right Ventricle heart
24 chr11:77565200-77567600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
25 chr11:77565200-77568400 ZNF genes & repeats Primary B cells from peripheral blood blood
26 chr11:77565400-77566000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
27 chr11:77565400-77566200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
28 chr11:77565400-77566200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
29 chr11:77565400-77566200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
30 chr11:77565400-77566200 ZNF genes & repeats Liver Liver
31 chr11:77565400-77566200 ZNF genes & repeats Brain Angular Gyrus brain
32 chr11:77565400-77566200 ZNF genes & repeats Brain Cingulate Gyrus brain
33 chr11:77565400-77566200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
34 chr11:77565400-77566200 ZNF genes & repeats Fetal Lung lung
35 chr11:77565400-77566200 ZNF genes & repeats Lung lung
36 chr11:77565400-77566400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
37 chr11:77565400-77566400 ZNF genes & repeats Brain Hippocampus Middle brain
38 chr11:77565400-77566400 ZNF genes & repeats Brain Substantia Nigra brain
39 chr11:77565400-77566400 ZNF genes & repeats Fetal Muscle Leg muscle
40 chr11:77565400-77566400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
41 chr11:77565400-77566400 ZNF genes & repeats Thymus Thymus
42 chr11:77565400-77566400 ZNF genes & repeats Spleen Spleen
43 chr11:77565400-77566400 ZNF genes & repeats NH-A brain
44 chr11:77565400-77566400 ZNF genes & repeats NHDF-Ad bronchial
45 chr11:77565400-77566600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
46 chr11:77565400-77567000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
47 chr11:77565400-77567000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
48 chr11:77565400-77567000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
49 chr11:77565400-77567000 ZNF genes & repeats Duodenum Mucosa Duodenum
50 chr11:77565400-77567200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell

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