Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1007862	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10240892	0.88[ASN][1000 genomes]
rs10245801	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10275933	0.82[EUR][1000 genomes]
rs11520770	0.80[AMR][1000 genomes]
rs11563447	0.97[EUR][1000 genomes]
rs11563574	0.97[EUR][1000 genomes]
rs11563971	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11563973	0.96[EUR][1000 genomes]
rs11563975	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11563976	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1547943	0.82[EUR][1000 genomes]
rs17429177	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17429249	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17429270	0.97[EUR][1000 genomes]
rs17429361	0.81[AMR][1000 genomes]
rs17439000	0.80[AMR][1000 genomes]
rs2106926	0.85[EUR][1000 genomes]
rs4357199	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4719889	0.83[EUR][1000 genomes]
rs4722689	0.82[EUR][1000 genomes]
rs4722690	0.82[ASN][1000 genomes]
rs4722691	0.86[ASN][1000 genomes]
rs6462010	0.81[ASN][1000 genomes]
rs6971228	0.85[ASN][1000 genomes]
rs6978314	0.83[EUR][1000 genomes]
rs722562	0.83[ASN][1000 genomes]
rs722563	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9332393	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531024	chr7:27194426-27461954	Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
2	nsv830930	chr7:27395838-27587355	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27394200-27403400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:27398200-27407400	Weak transcription	Pancreas	Pancrea
3	chr7:27399400-27403400	Weak transcription	Adipose Nuclei	Adipose
4	chr7:27400000-27400800	Enhancers	K562	blood
5	chr7:27400200-27401200	Enhancers	Stomach Mucosa	stomach
6	chr7:27400400-27403600	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr7:27400400-27403600	Weak transcription	Monocytes-CD14+_RO01746	blood

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