Variant report

Variant	rs4722691
Chromosome Location	chr7:27390865-27390866
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:27385251..27387696-chr7:27388686..27391421,2	K562	blood:
2	chr7:27389345..27391208-chr7:27395433..27397427,2	MCF-7	breast:
3	chr7:27385251..27387696-chr7:27388686..27392238,3	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1007862	0.84[ASN][1000 genomes]
rs10155834	0.91[CEU][hapmap];0.95[CHB][hapmap]
rs10240892	0.82[ASN][1000 genomes]
rs10245801	0.91[CHB][hapmap];0.83[JPT][hapmap];0.86[ASN][1000 genomes]
rs10275933	0.95[CHB][hapmap];0.84[ASN][1000 genomes]
rs11563971	0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs11563975	0.88[ASN][1000 genomes]
rs11563976	0.91[CHB][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs11563997	0.83[CHB][hapmap]
rs12674312	0.86[ASN][1000 genomes]
rs1547943	0.96[CHB][hapmap];0.82[JPT][hapmap];0.83[ASN][1000 genomes]
rs17429177	0.92[CHB][hapmap];0.87[ASN][1000 genomes]
rs17429249	0.87[ASN][1000 genomes]
rs17438605	0.83[ASN][1000 genomes]
rs1990123	0.91[CEU][hapmap];0.95[CHB][hapmap]
rs2391420	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4357199	0.95[CHB][hapmap];0.81[ASN][1000 genomes]
rs4719886	0.87[CHB][hapmap]
rs4719887	0.92[CEU][hapmap];0.91[CHB][hapmap];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4719889	0.85[ASN][1000 genomes]
rs4722689	0.95[CHB][hapmap];0.85[JPT][hapmap];0.87[YRI][hapmap];0.82[ASN][1000 genomes]
rs4722690	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6462010	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6945955	0.92[CEU][hapmap];0.95[CHB][hapmap]
rs6971228	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6978314	0.87[ASN][1000 genomes]
rs722562	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9332393	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531024	chr7:27194426-27461954	Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
2	nsv971154	chr7:27390702-27397127	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27390200-27391000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr7:27390200-27396000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr7:27390800-27392200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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