Variant report

Variant	rs13137565
Chromosome Location	chr4:144105698-144105699
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:144105640-144105925	A549	lung:	n/a	n/a
2	MYC	chr4:144105669-144105952	MCF-7	breast:	n/a	n/a
3	ELF1	chr4:144105620-144106346	HepG2	liver:	n/a	chr4:144106051-144106064 chr4:144106052-144106063
4	IRF1	chr4:144105206-144106285	K562	blood:	n/a	chr4:144106050-144106059
5	POLR2A	chr4:144105629-144106396	A549	lung:	n/a	n/a
6	TBL1XR1	chr4:144104684-144106232	K562	blood:	n/a	n/a
7	ELF1	chr4:144105597-144106442	HepG2	liver:	n/a	chr4:144106415-144106427 chr4:144106338-144106347 chr4:144106051-144106064 chr4:144106052-144106063
8	POLR2A	chr4:144105387-144106458	GM12891	blood:	n/a	n/a
9	REST	chr4:144105623-144105989	K562	blood:	n/a	n/a
10	ELK1	chr4:144105520-144106365	GM12878	blood:	n/a	n/a
11	CREB1	chr4:144105690-144105950	A549	lung:	n/a	n/a
12	TBP	chr4:144105422-144107136	HepG2	liver:	n/a	n/a
13	CTCF	chr4:144105680-144105830	AG04449	skin:	n/a	n/a
14	JUN	chr4:144105376-144105944	K562	blood:	n/a	n/a
15	POLR2A	chr4:144105207-144106325	K562	blood:	n/a	n/a
16	CREB1	chr4:144105408-144106098	H1-hESC	embryonic stem cell:	n/a	n/a
17	FOS	chr4:144105665-144106261	MCF10A-Er-Src	breast:	n/a	chr4:144106148-144106159
18	WRNIP1	chr4:144105409-144105824	GM12878	blood:	n/a	n/a
19	MXI1	chr4:144105472-144106499	GM12878	blood:	n/a	n/a
20	POLR2A	chr4:144105408-144106349	U87	brain:	n/a	n/a
21	POLR2A	chr4:144105228-144106464	ProgFib	skin:	n/a	n/a
22	POLR2A	chr4:144105393-144107163	GM15510	blood:	n/a	n/a
23	POLR2A	chr4:144105188-144107085	H1-hESC	embryonic stem cell:	n/a	n/a
24	MAX	chr4:144105542-144106001	A549	lung:	n/a	n/a
25	CTCF	chr4:144105680-144105830	HAc	cerebellar:	n/a	n/a
26	POLR2A	chr4:144105408-144106325	U87	brain:	n/a	n/a
27	SMARCB1	chr4:144105566-144107238	Hela-S3	cervix:	n/a	n/a
28	MAX	chr4:144105386-144106388	NB4	blood:	n/a	n/a
29	TAF1	chr4:144105382-144106386	K562	blood:	n/a	n/a
30	POLR2A	chr4:144105636-144105917	A549	lung:	n/a	n/a
31	POLR2A	chr4:144105398-144105966	GM12891	blood:	n/a	n/a
32	E2F6	chr4:144105676-144106334	K562	blood:	n/a	n/a
33	POLR2A	chr4:144105422-144107131	GM12878	blood:	n/a	n/a
34	POLR2A	chr4:144105500-144106380	HepG2	liver:	n/a	n/a
35	RAD21	chr4:144105557-144105910	H1-hESC	embryonic stem cell:	n/a	n/a
36	HEY1	chr4:144105407-144105950	HepG2	liver:	n/a	n/a
37	MAFK	chr4:144105343-144106328	Hela-S3	cervix:	n/a	chr4:144106149-144106159
38	ELF1	chr4:144105520-144106457	SK-N-SH	brain:	n/a	chr4:144106415-144106427 chr4:144106338-144106347 chr4:144106051-144106064 chr4:144106052-144106063
39	MAX	chr4:144105379-144107299	HepG2	liver:	n/a	n/a
40	YY1	chr4:144105515-144107256	HepG2	liver:	n/a	chr4:144106279-144106290 chr4:144106338-144106347 chr4:144106339-144106350 chr4:144106332-144106346
41	MAX	chr4:144105459-144106892	Hela-S3	cervix:	n/a	n/a
42	MAZ	chr4:144105457-144106749	Hela-S3	cervix:	n/a	n/a
43	TAF1	chr4:144105367-144106831	ECC-1	luminal epithelium:	n/a	n/a
44	NRF1	chr4:144105464-144105998	K562	blood:	n/a	chr4:144105592-144105606 chr4:144105865-144105876 chr4:144105592-144105601 chr4:144105592-144105603
45	ELF1	chr4:144105550-144106478	K562	blood:	n/a	chr4:144106415-144106427 chr4:144106338-144106347 chr4:144106461-144106473 chr4:144106051-144106064 chr4:144106052-144106063
46	RELA	chr4:144105409-144106287	GM19099	blood:	n/a	n/a
47	E2F6	chr4:144105489-144107129	K562	blood:	n/a	chr4:144106336-144106346 chr4:144105593-144105602 chr4:144106359-144106370
48	POLR2A	chr4:144105384-144105958	GM12891	blood:	n/a	n/a
49	ZNF384	chr4:144105652-144106269	K562	blood:	n/a	n/a
50	POLR2A	chr4:144105400-144107151	GM19193	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:144104818..144107585-chr4:144256509..144260468,4	MCF-7	breast:
2	chr4:144104958..144107554-chr4:144256815..144258504,3	K562	blood:
3	chr19:50093377..50093917-chr4:144105420..144106320,2	HCT-116	colon:
4	chr4:144092272..144094254-chr4:144104070..144105753,2	K562	blood:
5	chr4:144105629..144108054-chr4:144434549..144436931,4	K562	blood:
6	chr4:144104831..144107773-chr4:144434197..144436489,3	K562	blood:
7	chr1:28974828..28975662-chr4:144105371..144106181,2	HCT-116	colon:
8	chr4:143764792..143768376-chr4:144104488..144107848,3	MCF-7	breast:
9	chr4:144104098..144105841-chr4:144264877..144267593,2	K562	blood:
10	chr12:7052821..7053654-chr4:144105313..144106161,2	HCT-116	colon:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-INPP4B-2	chr4:144105661-144105982	ENSG00000250326.1
2	lnc-INPP4B-2	chr4:144105661-144106014	ENSG00000250326.1
3	lnc-INPP4B-2	chr4:144104326-144105956	NONHSAT098550

Variant related genes	Relation type
USP38	TF binding region
ENSG00000238923	Chromatin interaction
ENSG00000245112	Chromatin interaction
ENSG00000111678	Chromatin interaction
ENSG00000109458	Chromatin interaction
ENSG00000153147	Chromatin interaction
ENSG00000142546	Chromatin interaction
ENSG00000109452	Chromatin interaction
ENSG00000270103	Chromatin interaction
ENSG00000178972	Chromatin interaction

Extended variants
information (count: 185 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:185)

rs_ID	r²[population]
rs10000911	1.00[ASW][hapmap];0.95[CEU][hapmap];0.89[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];0.88[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10001113	0.90[ASN][1000 genomes]
rs10002867	0.90[ASN][1000 genomes]
rs10002888	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10004364	0.87[ASN][1000 genomes]
rs10004598	0.88[ASN][1000 genomes]
rs10009906	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10010367	0.90[ASN][1000 genomes]
rs10011709	0.93[ASN][1000 genomes]
rs10012434	0.93[ASN][1000 genomes]
rs10012713	0.82[CEU][hapmap]
rs10015190	0.93[ASN][1000 genomes]
rs10015279	0.83[ASN][1000 genomes]
rs10015751	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10019249	0.93[ASN][1000 genomes]
rs10026015	0.90[ASN][1000 genomes]
rs10028434	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10029373	0.90[ASN][1000 genomes]
rs10031363	0.88[ASN][1000 genomes]
rs10033104	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10034769	0.88[ASN][1000 genomes]
rs10155434	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1039762	0.90[ASN][1000 genomes]
rs1039763	0.90[ASN][1000 genomes]
rs10434185	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10519678	0.89[ASN][1000 genomes]
rs10857405	0.88[ASN][1000 genomes]
rs11100770	0.88[ASN][1000 genomes]
rs11100771	0.88[ASN][1000 genomes]
rs11100772	0.85[ASN][1000 genomes]
rs11100778	0.92[ASN][1000 genomes]
rs11100779	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11100780	1.00[CHD][hapmap];0.81[GIH][hapmap];0.87[JPT][hapmap];0.83[MEX][hapmap];0.93[ASN][1000 genomes]
rs11100781	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11100782	0.89[ASN][1000 genomes]
rs11100783	0.90[ASN][1000 genomes]
rs11724872	1.00[CHD][hapmap];0.81[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];0.90[ASN][1000 genomes]
rs11725565	0.81[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];0.90[ASN][1000 genomes]
rs11727441	0.90[ASN][1000 genomes]
rs11728962	0.89[ASN][1000 genomes]
rs11732484	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11737209	0.90[ASN][1000 genomes]
rs11933603	0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs11940580	0.90[ASN][1000 genomes]
rs11947142	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12499485	0.89[ASN][1000 genomes]
rs12501994	0.94[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12505142	0.89[ASN][1000 genomes]
rs12506120	0.84[ASN][1000 genomes]
rs12640698	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12649219	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13102238	0.87[ASN][1000 genomes]
rs13106497	0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs13113047	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13114280	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13116414	0.89[ASN][1000 genomes]
rs13116507	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13118943	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13119330	0.89[ASN][1000 genomes]
rs13128884	0.90[ASN][1000 genomes]
rs13138084	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13139457	0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs13140643	0.88[ASN][1000 genomes]
rs13151561	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1440410	0.89[ASN][1000 genomes]
rs1440411	0.90[ASN][1000 genomes]
rs1440412	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1440414	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1440416	0.90[ASN][1000 genomes]
rs1440418	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1440419	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1470130	0.90[ASN][1000 genomes]
rs1605581	0.90[ASN][1000 genomes]
rs2010767	0.89[ASN][1000 genomes]
rs2119269	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2165301	0.89[ASN][1000 genomes]
rs2165302	0.90[ASN][1000 genomes]
rs2323076	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2323077	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28470858	0.89[ASN][1000 genomes]
rs28592151	0.93[ASN][1000 genomes]
rs28649839	0.90[ASN][1000 genomes]
rs300894	0.82[CEU][hapmap]
rs300921	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs300924	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs300925	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs300927	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs300929	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs300934	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs300938	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs300939	0.90[ASN][1000 genomes]
rs300940	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs300941	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs300943	0.82[CEU][hapmap];0.82[MEX][hapmap]
rs300951	0.86[CEU][hapmap];0.88[CHB][hapmap]
rs34168479	0.90[ASN][1000 genomes]
rs34342939	0.89[ASN][1000 genomes]
rs34664017	0.93[ASN][1000 genomes]
rs3910622	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4131029	0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs4132266	1.00[CHD][hapmap];0.81[GIH][hapmap];0.94[JPT][hapmap];0.83[MEX][hapmap];0.93[ASN][1000 genomes]
rs4234886	1.00[CHD][hapmap];0.81[GIH][hapmap];0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs4234887	0.89[ASN][1000 genomes]
rs4285045	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4290853	0.89[ASN][1000 genomes]
rs4318600	0.88[ASN][1000 genomes]
rs4323054	0.88[ASN][1000 genomes]
rs4323055	0.88[ASN][1000 genomes]
rs4333135	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4336176	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4407450	0.89[ASN][1000 genomes]
rs4413361	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4502634	0.88[ASN][1000 genomes]
rs4511955	0.90[ASN][1000 genomes]
rs4513514	0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs4561881	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4566607	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4574353	0.89[ASN][1000 genomes]
rs4579067	0.82[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4582112	0.90[ASN][1000 genomes]
rs4626148	0.88[ASN][1000 genomes]
rs4637346	0.90[ASN][1000 genomes]
rs4690715	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4690771	0.88[ASN][1000 genomes]
rs4690775	0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs4690777	0.89[ASN][1000 genomes]
rs4690778	0.86[ASN][1000 genomes]
rs4690779	0.94[JPT][hapmap];0.90[ASN][1000 genomes]
rs4690780	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4690781	0.89[ASN][1000 genomes]
rs4690783	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs534750	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57168887	0.89[ASN][1000 genomes]
rs587254	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs632359	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6537150	0.88[ASN][1000 genomes]
rs6537151	0.88[ASN][1000 genomes]
rs6812522	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6816223	0.84[ASN][1000 genomes]
rs6818149	0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs6820340	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6820538	0.90[ASN][1000 genomes]
rs6822299	0.89[ASN][1000 genomes]
rs6826771	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6827229	0.90[ASN][1000 genomes]
rs6828369	0.89[ASN][1000 genomes]
rs6829621	0.88[ASN][1000 genomes]
rs6832943	0.89[ASN][1000 genomes]
rs6833582	0.89[ASN][1000 genomes]
rs6837133	0.84[ASN][1000 genomes]
rs6839312	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6845478	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6845907	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6848475	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6854861	0.88[ASN][1000 genomes]
rs6856785	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72719159	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72719160	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72719163	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72719173	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72719179	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72719180	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7435424	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7436840	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs763918	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7656276	0.93[ASN][1000 genomes]
rs7670439	0.93[ASN][1000 genomes]
rs7673827	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7675127	0.82[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7680365	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7685075	0.88[ASN][1000 genomes]
rs7685461	0.88[ASN][1000 genomes]
rs7687417	0.93[ASN][1000 genomes]
rs7692813	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7693583	0.88[ASN][1000 genomes]
rs7693817	0.88[ASN][1000 genomes]
rs9308169	0.89[ASN][1000 genomes]
rs9631769	0.88[ASN][1000 genomes]
rs9685571	0.88[ASN][1000 genomes]
rs9790396	0.88[ASN][1000 genomes]
rs9790822	0.88[ASN][1000 genomes]
rs985619	0.89[ASN][1000 genomes]
rs9992676	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9996072	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9998017	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs13137565	SLC10A7	cis	cerebellum	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:144104400-144109800	Active TSS	K562	blood
2	chr4:144104600-144106600	Active TSS	Skeletal Muscle Female	skeletal muscle
3	chr4:144104600-144108600	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr4:144104600-144109000	Active TSS	Duodenum Mucosa	Duodenum
5	chr4:144104600-144109600	Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr4:144104800-144105800	Flanking Active TSS	Primary B cells from cord blood	blood
7	chr4:144104800-144106200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr4:144104800-144108600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr4:144104800-144108800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
10	chr4:144104800-144108800	Active TSS	Duodenum Smooth Muscle	Duodenum
11	chr4:144104800-144109000	Active TSS	Psoas Muscle	Psoas
12	chr4:144104800-144109200	Active TSS	ES-I3 Cell Line	embryonic stem cell
13	chr4:144104800-144109600	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr4:144104800-144109600	Active TSS	Fetal Intestine Large	intestine
15	chr4:144104800-144110800	Active TSS	Right Ventricle	heart
16	chr4:144104800-144111000	Active TSS	NHLF	lung
17	chr4:144105000-144105800	Flanking Active TSS	Primary hematopoietic stem cells	blood
18	chr4:144105000-144106200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr4:144105000-144106600	Active TSS	Primary T cells fromperipheralblood	blood
20	chr4:144105000-144106600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
21	chr4:144105000-144106800	Active TSS	Fetal Thymus	thymus
22	chr4:144105000-144106800	Active TSS	Stomach Smooth Muscle	stomach
23	chr4:144105000-144107000	Active TSS	Brain Cingulate Gyrus	brain
24	chr4:144105000-144107200	Active TSS	Rectal Smooth Muscle	rectum
25	chr4:144105000-144108600	Active TSS	Brain Inferior Temporal Lobe	brain
26	chr4:144105000-144108800	Active TSS	HUES48 Cell Line	embryonic stem cell
27	chr4:144105000-144108800	Active TSS	Rectal Mucosa Donor 29	rectum
28	chr4:144105000-144108800	Active TSS	HMEC	breast
29	chr4:144105000-144109800	Active TSS	NHDF-Ad	bronchial
30	chr4:144105000-144110000	Active TSS	Colonic Mucosa	Colon
31	chr4:144105000-144110400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr4:144105000-144110400	Active TSS	Fetal Intestine Small	intestine
33	chr4:144105000-144110400	Active TSS	Right Atrium	heart
34	chr4:144105000-144111000	Active TSS	GM12878-XiMat	blood
35	chr4:144105200-144105800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
36	chr4:144105200-144106600	Active TSS	Fetal Muscle Trunk	muscle
37	chr4:144105200-144106600	Active TSS	Placenta	Placenta
38	chr4:144105200-144106600	Active TSS	Skeletal Muscle Male	skeletal muscle
39	chr4:144105200-144106800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr4:144105200-144106800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr4:144105200-144106800	Active TSS	Fetal Muscle Leg	muscle
42	chr4:144105200-144107000	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
43	chr4:144105200-144107000	Active TSS	Fetal Brain Female	brain
44	chr4:144105200-144107000	Active TSS	Fetal Lung	lung
45	chr4:144105200-144107000	Active TSS	Rectal Mucosa Donor 31	rectum
46	chr4:144105200-144107200	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
47	chr4:144105200-144108000	Active TSS	Fetal Brain Male	brain
48	chr4:144105200-144108200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr4:144105200-144108200	Active TSS	H9 Cell Line	embryonic stem cell
50	chr4:144105200-144108200	Active TSS	Colon Smooth Muscle	Colon

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