The 2.0 version of rSNPBase

Variant report

Variant rs13158413
Chromosome Location chr5:60813605-60813606
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60760600-60824800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr5:60760800-60821200 Weak transcription Esophagus oesophagus
3 chr5:60761000-60820800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:60764000-60820600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr5:60764800-60821000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr5:60767400-60821200 Weak transcription Lung lung
7 chr5:60767400-60837400 Weak transcription Spleen Spleen
8 chr5:60767600-60820800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr5:60768200-60818800 Weak transcription Thymus Thymus
10 chr5:60772000-60818400 Weak transcription HUVEC blood vessel
11 chr5:60773400-60815600 Weak transcription Ovary ovary
12 chr5:60781400-60821000 Weak transcription Fetal Kidney kidney
13 chr5:60785800-60820800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr5:60787000-60820600 Weak transcription Hela-S3 cervix
15 chr5:60788800-60821800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr5:60790200-60818800 Weak transcription Left Ventricle heart
17 chr5:60790600-60818800 Weak transcription NHLF lung
18 chr5:60791400-60821200 Weak transcription Primary T cells fromperipheralblood blood
19 chr5:60791400-60821400 Weak transcription Osteobl bone
20 chr5:60792600-60821400 Weak transcription Fetal Intestine Large intestine
21 chr5:60792800-60820200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr5:60792800-60820200 Weak transcription Primary B cells from peripheral blood blood
23 chr5:60792800-60821400 Weak transcription NH-A brain
24 chr5:60793400-60820800 Weak transcription Muscle Satellite Cultured Cells --
25 chr5:60793400-60821000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr5:60797000-60818800 Weak transcription Pancreas Pancrea
27 chr5:60797000-60821200 Weak transcription Gastric stomach
28 chr5:60797600-60818200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr5:60798800-60820800 Weak transcription Aorta Aorta
30 chr5:60800400-60818600 Weak transcription Liver Liver
31 chr5:60803400-60817200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr5:60803400-60820000 Weak transcription HSMMtube muscle
33 chr5:60804800-60821200 Weak transcription NHDF-Ad bronchial
34 chr5:60805600-60820000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr5:60805600-60820800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr5:60806000-60818800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr5:60806200-60815000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr5:60807600-60820800 Weak transcription Fetal Stomach stomach
39 chr5:60807600-60829800 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr5:60808200-60815800 Weak transcription A549 lung
41 chr5:60808200-60817000 Weak transcription Primary monocytes fromperipheralblood blood
42 chr5:60808200-60821600 Weak transcription Fetal Thymus thymus
43 chr5:60808400-60818400 Weak transcription Primary B cells from cord blood blood
44 chr5:60808600-60820000 Weak transcription Brain Angular Gyrus brain
45 chr5:60808800-60820200 Weak transcription Primary T cells from cord blood blood
46 chr5:60809000-60818000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr5:60809800-60817000 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr5:60810600-60821000 Weak transcription Stomach Smooth Muscle stomach
49 chr5:60811400-60817200 Weak transcription Brain Substantia Nigra brain
50 chr5:60811400-60820800 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015