Variant report
| Variant | rs11954430 |
|---|---|
| Chromosome Location | chr5:60765209-60765210 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:60744400-60767800 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 2 | chr5:60747600-60770600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 3 | chr5:60757600-60771000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 4 | chr5:60758000-60772800 | Weak transcription | Fetal Intestine Large | intestine |
| 5 | chr5:60759400-60773000 | Weak transcription | Right Ventricle | heart |
| 6 | chr5:60759800-60771400 | Weak transcription | Fetal Heart | heart |
| 7 | chr5:60759800-60807400 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr5:60760400-60765400 | Enhancers | Brain Cingulate Gyrus | brain |
| 9 | chr5:60760400-60807800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 10 | chr5:60760600-60824800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 11 | chr5:60760800-60767000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 12 | chr5:60760800-60773000 | Weak transcription | Gastric | stomach |
| 13 | chr5:60760800-60821200 | Weak transcription | Esophagus | oesophagus |
| 14 | chr5:60761000-60765800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr5:60761000-60767000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 16 | chr5:60761000-60767200 | Weak transcription | Lung | lung |
| 17 | chr5:60761000-60769800 | Weak transcription | Pancreas | Pancrea |
| 18 | chr5:60761000-60773000 | Weak transcription | Left Ventricle | heart |
| 19 | chr5:60761000-60781200 | Weak transcription | Psoas Muscle | Psoas |
| 20 | chr5:60761000-60798000 | Weak transcription | Aorta | Aorta |
| 21 | chr5:60761000-60820800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr5:60762400-60775000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 23 | chr5:60763000-60768400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr5:60763800-60766600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 25 | chr5:60763800-60768600 | Weak transcription | HUVEC | blood vessel |
| 26 | chr5:60763800-60773000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr5:60763800-60792000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 28 | chr5:60763800-60792400 | Weak transcription | HMEC | breast |
| 29 | chr5:60763800-60804400 | Weak transcription | NHDF-Ad | bronchial |
| 30 | chr5:60764000-60772800 | Weak transcription | Fetal Lung | lung |
| 31 | chr5:60764000-60773000 | Weak transcription | NHEK | skin |
| 32 | chr5:60764000-60773400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 33 | chr5:60764000-60820600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 34 | chr5:60764200-60766800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 35 | chr5:60764200-60767000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 36 | chr5:60764200-60767000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 37 | chr5:60764200-60767200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 38 | chr5:60764200-60773000 | Weak transcription | NHLF | lung |
| 39 | chr5:60764200-60775200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 40 | chr5:60764200-60781400 | Weak transcription | HSMMtube | muscle |
| 41 | chr5:60764400-60768600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr5:60764600-60766800 | Weak transcription | Brain Anterior Caudate | brain |
| 43 | chr5:60764600-60767000 | Weak transcription | Fetal Intestine Small | intestine |
| 44 | chr5:60764600-60768000 | Weak transcription | Liver | Liver |
| 45 | chr5:60764600-60768600 | Weak transcription | HSMM | muscle |
| 46 | chr5:60764600-60771800 | Weak transcription | Hela-S3 | cervix |
| 47 | chr5:60764600-60772800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 48 | chr5:60764600-60772800 | Weak transcription | Ovary | ovary |
| 49 | chr5:60764600-60775200 | Weak transcription | Colon Smooth Muscle | Colon |
| 50 | chr5:60764600-60775200 | Weak transcription | Small Intestine | intestine |
