Variant report

Variant rs6449531
Chromosome Location chr5:60712212-60712213
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60682600-60712400 Weak transcription Esophagus oesophagus
2 chr5:60698000-60725400 Weak transcription Spleen Spleen
3 chr5:60705200-60727200 Weak transcription Fetal Stomach stomach
4 chr5:60705400-60713400 Weak transcription Brain Germinal Matrix brain
5 chr5:60705400-60713600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr5:60705600-60719000 Weak transcription Fetal Brain Male brain
7 chr5:60706000-60713400 Weak transcription Adipose Nuclei Adipose
8 chr5:60706000-60713600 Weak transcription Primary B cells from cord blood blood
9 chr5:60706000-60719200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr5:60706000-60721400 Weak transcription Fetal Intestine Large intestine
11 chr5:60706000-60728000 Weak transcription Fetal Intestine Small intestine
12 chr5:60706200-60719400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr5:60706200-60727800 Weak transcription HUVEC blood vessel
14 chr5:60707000-60712400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr5:60708400-60713400 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr5:60708400-60719200 Weak transcription Ovary ovary
17 chr5:60708800-60712400 Weak transcription Fetal Brain Female brain
18 chr5:60709800-60712600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:60709800-60712800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr5:60709800-60713200 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr5:60709800-60713800 Enhancers Brain Substantia Nigra brain
22 chr5:60709800-60714000 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr5:60709800-60714000 Enhancers H1 Cell Line embryonic stem cell
24 chr5:60709800-60714000 Enhancers HUES48 Cell Line embryonic stem cell
25 chr5:60709800-60714000 Enhancers HUES6 Cell Line embryonic stem cell
26 chr5:60709800-60714000 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr5:60709800-60714000 Enhancers Brain Anterior Caudate brain
28 chr5:60709800-60716400 Enhancers Brain Hippocampus Middle brain
29 chr5:60710000-60719200 Weak transcription NHLF lung
30 chr5:60710200-60712400 Weak transcription H9 Cell Line embryonic stem cell
31 chr5:60710200-60712400 Weak transcription Liver Liver
32 chr5:60710200-60712400 Weak transcription Pancreas Pancrea
33 chr5:60710200-60719600 Weak transcription Left Ventricle heart
34 chr5:60710600-60714000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:60710800-60712400 Weak transcription Stomach Smooth Muscle stomach
36 chr5:60710800-60712600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:60710800-60712800 Enhancers NHEK skin
38 chr5:60711000-60712400 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr5:60711000-60712600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr5:60711000-60712600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr5:60711000-60712600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr5:60711000-60719400 Weak transcription Psoas Muscle Psoas
43 chr5:60711000-60735800 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr5:60711200-60713200 Weak transcription Stomach Mucosa stomach
45 chr5:60711200-60713600 Enhancers Colon Smooth Muscle Colon
46 chr5:60711200-60713800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr5:60711400-60712600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr5:60711400-60713600 Enhancers Primary T helper cells PMA-I stimulated --
49 chr5:60711400-60714000 Enhancers Cortex derived primary cultured neurospheres brain
50 chr5:60711400-60714000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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