The 2.0 version of rSNPBase

Variant report

Variant rs1374043
Chromosome Location chr5:60774227-60774228
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60759800-60807400 Weak transcription Fetal Stomach stomach
2 chr5:60760400-60807800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr5:60760600-60824800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr5:60760800-60821200 Weak transcription Esophagus oesophagus
5 chr5:60761000-60781200 Weak transcription Psoas Muscle Psoas
6 chr5:60761000-60798000 Weak transcription Aorta Aorta
7 chr5:60761000-60820800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:60762400-60775000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr5:60763800-60792000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr5:60763800-60792400 Weak transcription HMEC breast
11 chr5:60763800-60804400 Weak transcription NHDF-Ad bronchial
12 chr5:60764000-60820600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr5:60764200-60775200 Weak transcription Duodenum Mucosa Duodenum
14 chr5:60764200-60781400 Weak transcription HSMMtube muscle
15 chr5:60764600-60775200 Weak transcription Colon Smooth Muscle Colon
16 chr5:60764600-60775200 Weak transcription Small Intestine intestine
17 chr5:60764600-60780400 Weak transcription Fetal Kidney kidney
18 chr5:60764600-60792200 Weak transcription NH-A brain
19 chr5:60764800-60775200 Weak transcription Adipose Nuclei Adipose
20 chr5:60764800-60790000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:60764800-60790000 Weak transcription Muscle Satellite Cultured Cells --
22 chr5:60764800-60790000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr5:60764800-60792400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:60764800-60821000 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr5:60765200-60789600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr5:60765200-60798200 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr5:60766000-60792600 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr5:60767400-60792400 Weak transcription Rectal Smooth Muscle rectum
29 chr5:60767400-60821200 Weak transcription Lung lung
30 chr5:60767400-60837400 Weak transcription Spleen Spleen
31 chr5:60767600-60789400 Weak transcription Primary B cells from peripheral blood blood
32 chr5:60767600-60791000 Weak transcription Primary T cells fromperipheralblood blood
33 chr5:60767600-60807000 Weak transcription Fetal Intestine Small intestine
34 chr5:60767600-60820800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr5:60767800-60775000 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr5:60767800-60775400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr5:60767800-60784800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr5:60768200-60775200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr5:60768200-60818800 Weak transcription Thymus Thymus
40 chr5:60768400-60782800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr5:60768600-60777600 Strong transcription HSMM muscle
42 chr5:60768600-60793000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr5:60770400-60792200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr5:60770800-60780600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr5:60770800-60798600 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr5:60771000-60780400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr5:60771000-60781800 Weak transcription Fetal Muscle Leg muscle
48 chr5:60771000-60790200 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr5:60771000-60791000 Weak transcription Fetal Thymus thymus
50 chr5:60771200-60776000 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015