The 2.0 version of rSNPBase

Variant report

Variant rs13185068
Chromosome Location chr5:60824235-60824236
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60760600-60824800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr5:60767400-60837400 Weak transcription Spleen Spleen
3 chr5:60807600-60829800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr5:60812400-60827200 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr5:60815400-60833000 Weak transcription Fetal Brain Male brain
6 chr5:60815800-60833000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr5:60815800-60837200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr5:60816000-60831200 Weak transcription Ovary ovary
9 chr5:60816000-60837800 Weak transcription H9 Cell Line embryonic stem cell
10 chr5:60816600-60827200 Weak transcription Right Ventricle heart
11 chr5:60817000-60824800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr5:60817000-60837000 Strong transcription Primary monocytes fromperipheralblood blood
13 chr5:60817000-60837400 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr5:60817600-60828800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr5:60817800-60843800 Strong transcription HSMM muscle
16 chr5:60818000-60838000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:60818400-60825800 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr5:60818800-60837800 Weak transcription Fetal Heart heart
19 chr5:60819000-60837400 Weak transcription H1 Cell Line embryonic stem cell
20 chr5:60819000-60837800 Weak transcription Small Intestine intestine
21 chr5:60819200-60837800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr5:60819600-60837000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:60819600-60837600 Weak transcription Brain Germinal Matrix brain
24 chr5:60819800-60830200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr5:60819800-60830600 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr5:60819800-60832400 Weak transcription HMEC breast
27 chr5:60821400-60825800 Weak transcription Psoas Muscle Psoas
28 chr5:60821600-60826600 Weak transcription Aorta Aorta
29 chr5:60821600-60829000 Weak transcription Placenta Amnion Placenta Amnion
30 chr5:60821600-60834400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr5:60821800-60824400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr5:60821800-60827200 Weak transcription Placenta Placenta
33 chr5:60821800-60827200 Weak transcription Rectal Smooth Muscle rectum
34 chr5:60821800-60828200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:60821800-60829000 Weak transcription Esophagus oesophagus
36 chr5:60821800-60829000 Weak transcription Pancreas Pancrea
37 chr5:60821800-60831400 Weak transcription NHEK skin
38 chr5:60821800-60833000 Weak transcription Stomach Mucosa stomach
39 chr5:60821800-60835200 Weak transcription Gastric stomach
40 chr5:60821800-60836800 Weak transcription Colonic Mucosa Colon
41 chr5:60822000-60824400 Weak transcription Fetal Intestine Small intestine
42 chr5:60822000-60824400 Weak transcription Fetal Stomach stomach
43 chr5:60822000-60825200 Weak transcription Muscle Satellite Cultured Cells --
44 chr5:60822000-60825600 Weak transcription Primary hematopoietic stem cells blood
45 chr5:60822000-60833800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:60822000-60834400 Weak transcription Thymus Thymus
47 chr5:60822200-60824400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr5:60822200-60824600 Weak transcription Left Ventricle heart
49 chr5:60822200-60824800 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr5:60822200-60825200 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015