The 2.0 version of rSNPBase

Variant report

Variant rs6898746
Chromosome Location chr5:60843706-60843707
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60817800-60843800 Strong transcription HSMM muscle
2 chr5:60837800-60844000 Strong transcription NHLF lung
3 chr5:60838200-60843800 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr5:60839000-60843800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:60839000-60850000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr5:60839200-60843800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:60839400-60848200 Weak transcription Fetal Heart heart
8 chr5:60839800-60844000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr5:60840000-60843800 Strong transcription A549 lung
10 chr5:60840000-60844000 Weak transcription Pancreas Pancrea
11 chr5:60840000-60844200 Weak transcription HMEC breast
12 chr5:60840000-60844400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr5:60840000-60844400 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr5:60840000-60844400 Weak transcription Spleen Spleen
15 chr5:60840000-60844600 Weak transcription Aorta Aorta
16 chr5:60840000-60844600 Weak transcription Fetal Intestine Small intestine
17 chr5:60840000-60844800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:60840000-60846400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr5:60840000-60847200 Weak transcription Small Intestine intestine
20 chr5:60840000-60847400 Weak transcription Brain Substantia Nigra brain
21 chr5:60840200-60843800 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr5:60840200-60843800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr5:60840200-60844000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr5:60840200-60844000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr5:60840200-60844200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr5:60840200-60844200 Weak transcription Brain Hippocampus Middle brain
27 chr5:60840200-60844200 Weak transcription Gastric stomach
28 chr5:60840200-60844400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:60840200-60844400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr5:60840200-60844800 Weak transcription Fetal Muscle Trunk muscle
31 chr5:60840200-60845600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr5:60840200-60846000 Weak transcription Primary T cells from cord blood blood
33 chr5:60840200-60847600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr5:60840200-60847800 Weak transcription Stomach Smooth Muscle stomach
35 chr5:60840200-60852200 Weak transcription Left Ventricle heart
36 chr5:60840400-60844200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr5:60840600-60844200 Weak transcription NHEK skin
38 chr5:60840800-60845000 Weak transcription NH-A brain
39 chr5:60840800-60845200 Weak transcription Colon Smooth Muscle Colon
40 chr5:60840800-60845800 Weak transcription Fetal Muscle Leg muscle
41 chr5:60840800-60847400 Weak transcription Brain Angular Gyrus brain
42 chr5:60840800-60847800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr5:60841000-60844200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr5:60841000-60846200 Weak transcription Fetal Stomach stomach
45 chr5:60841200-60843800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr5:60841200-60844200 Weak transcription Primary T cells fromperipheralblood blood
47 chr5:60841200-60844200 Weak transcription Fetal Brain Male brain
48 chr5:60841200-60844200 Weak transcription Rectal Smooth Muscle rectum
49 chr5:60841200-60844400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr5:60841200-60844600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015