Variant report
Variant | rs12187112 |
---|---|
Chromosome Location | chr5:60720700-60720701 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:60698000-60725400 | Weak transcription | Spleen | Spleen |
2 | chr5:60705200-60727200 | Weak transcription | Fetal Stomach | stomach |
3 | chr5:60706000-60721400 | Weak transcription | Fetal Intestine Large | intestine |
4 | chr5:60706000-60728000 | Weak transcription | Fetal Intestine Small | intestine |
5 | chr5:60706200-60727800 | Weak transcription | HUVEC | blood vessel |
6 | chr5:60711000-60735800 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
7 | chr5:60712600-60727600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
8 | chr5:60712800-60721200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
9 | chr5:60712800-60725400 | Weak transcription | Pancreas | Pancrea |
10 | chr5:60713400-60732800 | Weak transcription | Small Intestine | intestine |
11 | chr5:60713800-60724400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
12 | chr5:60714000-60725000 | Weak transcription | H1 Cell Line | embryonic stem cell |
13 | chr5:60714000-60725200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
14 | chr5:60714000-60725600 | Weak transcription | Stomach Mucosa | stomach |
15 | chr5:60714000-60727800 | Weak transcription | Brain Germinal Matrix | brain |
16 | chr5:60716400-60721400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
17 | chr5:60717200-60726200 | Weak transcription | Primary B cells from cord blood | blood |
18 | chr5:60717400-60724800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
19 | chr5:60719000-60721200 | Enhancers | Fetal Brain Male | brain |
20 | chr5:60719000-60722000 | Enhancers | Brain Cingulate Gyrus | brain |
21 | chr5:60719200-60721000 | Enhancers | Ovary | ovary |
22 | chr5:60719200-60721800 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
23 | chr5:60719200-60722400 | Enhancers | Fetal Heart | heart |
24 | chr5:60719200-60723600 | Enhancers | Brain Angular Gyrus | brain |
25 | chr5:60719200-60729400 | Weak transcription | Fetal Muscle Trunk | muscle |
26 | chr5:60719400-60721800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
27 | chr5:60719600-60720800 | Enhancers | Left Ventricle | heart |
28 | chr5:60719600-60726600 | Weak transcription | Thymus | Thymus |
29 | chr5:60719800-60721000 | Weak transcription | Hela-S3 | cervix |
30 | chr5:60719800-60724600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
31 | chr5:60719800-60724600 | Weak transcription | Liver | Liver |
32 | chr5:60719800-60725400 | Weak transcription | Fetal Kidney | kidney |
33 | chr5:60719800-60745200 | Weak transcription | NHDF-Ad | bronchial |
34 | chr5:60720000-60721000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
35 | chr5:60720000-60721000 | Weak transcription | HSMM | muscle |
36 | chr5:60720000-60721200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
37 | chr5:60720000-60721200 | Weak transcription | Osteobl | bone |
38 | chr5:60720000-60721400 | Enhancers | Brain Inferior Temporal Lobe | brain |
39 | chr5:60720000-60721400 | Enhancers | Duodenum Smooth Muscle | Duodenum |
40 | chr5:60720000-60721400 | Weak transcription | Right Ventricle | heart |
41 | chr5:60720000-60721400 | Enhancers | A549 | lung |
42 | chr5:60720000-60721600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
43 | chr5:60720000-60721800 | Enhancers | Colon Smooth Muscle | Colon |
44 | chr5:60720000-60722000 | Enhancers | Brain Anterior Caudate | brain |
45 | chr5:60720000-60722000 | Enhancers | Brain Hippocampus Middle | brain |
46 | chr5:60720000-60724200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
47 | chr5:60720000-60724600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
48 | chr5:60720000-60725000 | Weak transcription | H9 Cell Line | embryonic stem cell |
49 | chr5:60720000-60725000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
50 | chr5:60720000-60725000 | Weak transcription | Gastric | stomach |