Variant report
| Variant | rs467438 |
|---|---|
| Chromosome Location | chr5:40826995-40826996 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:40814600-40827000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 2 | chr5:40818600-40827000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 3 | chr5:40820400-40827400 | Weak transcription | Brain Substantia Nigra | brain |
| 4 | chr5:40821000-40827400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 5 | chr5:40821400-40828800 | Weak transcription | Gastric | stomach |
| 6 | chr5:40821600-40827200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr5:40823600-40833200 | Strong transcription | Thymus | Thymus |
| 8 | chr5:40824200-40827200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 9 | chr5:40824200-40830000 | Weak transcription | Aorta | Aorta |
| 10 | chr5:40824200-40833000 | Weak transcription | Fetal Heart | heart |
| 11 | chr5:40824200-40833000 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr5:40824400-40827200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 13 | chr5:40824400-40828800 | Strong transcription | A549 | lung |
| 14 | chr5:40824800-40827000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 15 | chr5:40824800-40833000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 16 | chr5:40824800-40833200 | Strong transcription | Fetal Thymus | thymus |
| 17 | chr5:40824800-40833600 | Strong transcription | Brain Germinal Matrix | brain |
| 18 | chr5:40825000-40832600 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 19 | chr5:40825000-40832800 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 20 | chr5:40825200-40827000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 21 | chr5:40825200-40827400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 22 | chr5:40825200-40827600 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr5:40825200-40830000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 24 | chr5:40825200-40831400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr5:40825200-40832200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 26 | chr5:40825200-40832200 | Strong transcription | Liver | Liver |
| 27 | chr5:40825200-40832600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 28 | chr5:40825200-40833200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr5:40825200-40833400 | Strong transcription | Brain Anterior Caudate | brain |
| 30 | chr5:40825400-40827400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 31 | chr5:40825400-40830400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 32 | chr5:40825400-40830800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 33 | chr5:40825400-40831400 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 34 | chr5:40825400-40831800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 35 | chr5:40825400-40832000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 36 | chr5:40825400-40833800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 37 | chr5:40825600-40827800 | Strong transcription | Right Ventricle | heart |
| 38 | chr5:40825600-40831200 | Strong transcription | NHLF | lung |
| 39 | chr5:40825600-40831600 | Strong transcription | HMEC | breast |
| 40 | chr5:40825600-40831800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 41 | chr5:40825600-40831800 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr5:40825600-40831800 | Strong transcription | NH-A | brain |
| 43 | chr5:40825600-40832000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 44 | chr5:40825600-40832000 | Strong transcription | Osteobl | bone |
| 45 | chr5:40825600-40832200 | Strong transcription | HSMM | muscle |
| 46 | chr5:40825600-40832600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 47 | chr5:40825600-40832600 | Strong transcription | Fetal Stomach | stomach |
| 48 | chr5:40825600-40832600 | Strong transcription | Spleen | Spleen |
| 49 | chr5:40825600-40832800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 50 | chr5:40825600-40833000 | Strong transcription | Brain Inferior Temporal Lobe | brain |
