The 2.0 version of rSNPBase

Variant report

Variant rs154282
Chromosome Location chr5:40787689-40787690
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:40756200-40797200 Weak transcription Gastric stomach
2 chr5:40756400-40797400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:40765400-40796600 Weak transcription Right Ventricle heart
4 chr5:40765600-40796600 Weak transcription Placenta Amnion Placenta Amnion
5 chr5:40771600-40788600 Weak transcription Fetal Stomach stomach
6 chr5:40773000-40788200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr5:40776200-40797000 Weak transcription Colonic Mucosa Colon
8 chr5:40777000-40787800 Weak transcription HMEC breast
9 chr5:40777000-40788000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr5:40777000-40788200 Weak transcription Brain Anterior Caudate brain
11 chr5:40777000-40789400 Weak transcription Fetal Heart heart
12 chr5:40777000-40796600 Weak transcription Stomach Smooth Muscle stomach
13 chr5:40777000-40796600 Weak transcription Thymus Thymus
14 chr5:40777000-40796800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr5:40777000-40797000 Weak transcription H1 Cell Line embryonic stem cell
16 chr5:40777200-40787800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr5:40777200-40787800 Weak transcription Primary B cells from cord blood blood
18 chr5:40777200-40787800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr5:40777200-40788000 Weak transcription Primary hematopoietic stem cells blood
20 chr5:40777200-40788000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr5:40777200-40788000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:40777200-40788200 Weak transcription Primary T cells from cord blood blood
23 chr5:40777200-40788200 Weak transcription Dnd41 blood
24 chr5:40777200-40791400 Weak transcription Brain Angular Gyrus brain
25 chr5:40777200-40796000 Weak transcription Lung lung
26 chr5:40777200-40796600 Weak transcription Fetal Thymus thymus
27 chr5:40777200-40796800 Weak transcription Rectal Smooth Muscle rectum
28 chr5:40777400-40787800 Weak transcription Fetal Brain Female brain
29 chr5:40777600-40788400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr5:40777600-40789400 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr5:40777600-40792000 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr5:40777600-40792800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr5:40777600-40795200 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr5:40777600-40795600 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr5:40777800-40788400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr5:40777800-40789600 Weak transcription Primary monocytes fromperipheralblood blood
37 chr5:40777800-40795600 Weak transcription Primary B cells from peripheral blood blood
38 chr5:40777800-40796600 Weak transcription NH-A brain
39 chr5:40778000-40795400 Weak transcription Primary T cells fromperipheralblood blood
40 chr5:40781000-40791200 Weak transcription NHEK skin
41 chr5:40781000-40796800 Weak transcription Aorta Aorta
42 chr5:40782400-40788400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr5:40782400-40788400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr5:40782400-40790000 Weak transcription Left Ventricle heart
45 chr5:40782400-40791400 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr5:40782400-40795600 Weak transcription NHLF lung
47 chr5:40782600-40787800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr5:40782600-40787800 Weak transcription Muscle Satellite Cultured Cells --
49 chr5:40782600-40787800 Weak transcription HSMM muscle
50 chr5:40782600-40788000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015