The 2.0 version of rSNPBase

Variant report

Variant rs4129381
Chromosome Location chr5:40671912-40671913
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:40667600-40676000 Weak transcription Muscle Satellite Cultured Cells --
2 chr5:40668200-40675800 Enhancers Primary T helper naive cells fromperipheralblood blood
3 chr5:40668600-40677600 Enhancers Primary hematopoietic stem cells short term culture blood
4 chr5:40668800-40673800 Enhancers Primary monocytes fromperipheralblood blood
5 chr5:40668800-40677200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr5:40668800-40678600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr5:40669000-40674000 Enhancers Primary hematopoietic stem cells blood
8 chr5:40669600-40672200 Enhancers Primary neutrophils fromperipheralblood blood
9 chr5:40669800-40676800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr5:40670000-40672800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr5:40670000-40674400 Weak transcription Duodenum Mucosa Duodenum
12 chr5:40670400-40672400 Weak transcription Primary B cells from peripheral blood blood
13 chr5:40670400-40672400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr5:40670400-40672400 Weak transcription Thymus Thymus
15 chr5:40670600-40674600 Enhancers Primary T helper cells PMA-I stimulated --
16 chr5:40670800-40672800 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr5:40670800-40673400 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr5:40670800-40674000 Weak transcription Stomach Mucosa stomach
19 chr5:40670800-40675800 Enhancers Primary T cells from cord blood blood
20 chr5:40671000-40672000 Weak transcription Fetal Thymus thymus
21 chr5:40671000-40672600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr5:40671000-40672600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr5:40671000-40672600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr5:40671000-40674800 Weak transcription Primary T cells fromperipheralblood blood
25 chr5:40671200-40672000 Enhancers Hela-S3 cervix
26 chr5:40671400-40672600 Weak transcription Dnd41 blood
27 chr5:40671400-40674800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr5:40671400-40676000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr5:40671600-40672000 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr5:40671600-40672000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr5:40671600-40672800 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr5:40671600-40673200 Enhancers Primary B cells from cord blood blood

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Last update: Aug 31, 2015