Variant report
| Variant | rs4978558 |
|---|---|
| Chromosome Location | chr9:116649232-116649233 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:116639200-116652800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr9:116639200-116663400 | Weak transcription | Gastric | stomach |
| 3 | chr9:116642000-116649400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr9:116644600-116650400 | Weak transcription | Brain Germinal Matrix | brain |
| 5 | chr9:116646800-116649800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr9:116646800-116650400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 7 | chr9:116646800-116650600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 8 | chr9:116646800-116650800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr9:116647000-116650200 | Enhancers | HUVEC | blood vessel |
| 10 | chr9:116647000-116650600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 11 | chr9:116647000-116650800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 12 | chr9:116647000-116651800 | Enhancers | Fetal Muscle Leg | muscle |
| 13 | chr9:116647200-116649800 | Enhancers | Stomach Mucosa | stomach |
| 14 | chr9:116647400-116649600 | Enhancers | NH-A | brain |
| 15 | chr9:116647400-116651200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 16 | chr9:116647600-116649400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 17 | chr9:116647600-116649800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 18 | chr9:116647600-116649800 | Weak transcription | Esophagus | oesophagus |
| 19 | chr9:116647600-116650000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 20 | chr9:116648000-116649600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 21 | chr9:116648000-116649800 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr9:116648000-116649800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr9:116648000-116651200 | Enhancers | Fetal Stomach | stomach |
| 24 | chr9:116648200-116649600 | Enhancers | Fetal Lung | lung |
| 25 | chr9:116648200-116649600 | Enhancers | Small Intestine | intestine |
| 26 | chr9:116648200-116649600 | Enhancers | A549 | lung |
| 27 | chr9:116648200-116650600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr9:116648200-116651000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 29 | chr9:116648400-116649600 | Enhancers | Brain Substantia Nigra | brain |
| 30 | chr9:116648400-116649600 | Active TSS | Colon Smooth Muscle | Colon |
| 31 | chr9:116648400-116649600 | Enhancers | Dnd41 | blood |
| 32 | chr9:116648400-116649800 | Enhancers | HSMMtube | muscle |
| 33 | chr9:116648600-116649400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 34 | chr9:116648600-116649400 | Active TSS | Duodenum Mucosa | Duodenum |
| 35 | chr9:116648600-116649600 | Active TSS | Stomach Smooth Muscle | stomach |
| 36 | chr9:116648600-116649800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 37 | chr9:116648600-116649800 | Weak transcription | Pancreas | Pancrea |
| 38 | chr9:116648600-116650600 | Weak transcription | Placenta | Placenta |
| 39 | chr9:116648600-116650600 | Enhancers | Right Ventricle | heart |
| 40 | chr9:116648800-116649400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 41 | chr9:116648800-116649400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 42 | chr9:116648800-116649400 | Weak transcription | Fetal Thymus | thymus |
| 43 | chr9:116648800-116649400 | Active TSS | Monocytes-CD14+_RO01746 | blood |
| 44 | chr9:116648800-116649800 | Weak transcription | Psoas Muscle | Psoas |
| 45 | chr9:116648800-116650000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 46 | chr9:116648800-116650200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 47 | chr9:116648800-116650200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 48 | chr9:116648800-116650400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 49 | chr9:116649000-116649400 | Weak transcription | Fetal Heart | heart |
| 50 | chr9:116649000-116649600 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
