Variant report

Variant rs57996659
Chromosome Location chr6:35397273-35397274
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35383600-35402600 Weak transcription Fetal Heart heart
2 chr6:35392600-35402800 Weak transcription Colon Smooth Muscle Colon
3 chr6:35394600-35398200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
4 chr6:35394600-35403000 Weak transcription Brain Germinal Matrix brain
5 chr6:35395000-35398400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:35395000-35399800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr6:35395200-35402200 Weak transcription Left Ventricle heart
8 chr6:35395200-35404400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr6:35395400-35397400 ZNF genes & repeats Fetal Intestine Large intestine
10 chr6:35395400-35397800 Weak transcription Placenta Amnion Placenta Amnion
11 chr6:35395400-35398200 ZNF genes & repeats Duodenum Mucosa Duodenum
12 chr6:35395400-35402200 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr6:35395600-35402800 Weak transcription Psoas Muscle Psoas
14 chr6:35395800-35403000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr6:35395800-35403200 Weak transcription Fetal Muscle Trunk muscle
16 chr6:35396000-35397600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr6:35396000-35397600 ZNF genes & repeats Colonic Mucosa Colon
18 chr6:35396200-35398000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr6:35396400-35397400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
20 chr6:35396400-35397400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
21 chr6:35396400-35397600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
22 chr6:35396400-35402200 Weak transcription Right Ventricle heart
23 chr6:35396600-35397400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
24 chr6:35396600-35397400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:35396600-35397400 ZNF genes & repeats NHDF-Ad bronchial
26 chr6:35396600-35397600 ZNF genes & repeats HSMM muscle
27 chr6:35396600-35398400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:35396800-35398200 ZNF genes & repeats Muscle Satellite Cultured Cells --
29 chr6:35397000-35397400 ZNF genes & repeats Osteobl bone
30 chr6:35397000-35397600 ZNF genes & repeats Brain Hippocampus Middle brain
31 chr6:35397000-35397600 Weak transcription Small Intestine intestine
32 chr6:35397000-35399400 Weak transcription Gastric stomach
33 chr6:35397200-35397400 Enhancers HepG2 liver
34 chr6:35397200-35397600 Weak transcription HSMMtube muscle
35 chr6:35397200-35397800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:35397200-35398000 Weak transcription NHLF lung
37 chr6:35397200-35403400 Weak transcription H1 Cell Line embryonic stem cell

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