The 2.0 version of rSNPBase

Variant report

Variant rs58697860
Chromosome Location chr15:55636112-55636113
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55611800-55640000 Weak transcription Gastric stomach
2 chr15:55611800-55699400 Weak transcription Colonic Mucosa Colon
3 chr15:55612000-55636400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr15:55612000-55665000 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr15:55612000-55671000 Weak transcription Right Ventricle heart
6 chr15:55612000-55671000 Weak transcription Small Intestine intestine
7 chr15:55612600-55640400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr15:55612600-55650200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr15:55612600-55663600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr15:55612600-55675600 Weak transcription Aorta Aorta
11 chr15:55612800-55640400 Weak transcription NHLF lung
12 chr15:55612800-55649600 Weak transcription Muscle Satellite Cultured Cells --
13 chr15:55612800-55677600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr15:55614800-55649000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr15:55619600-55640000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr15:55619800-55637600 Strong transcription Primary T regulatory cells fromperipheralblood blood
17 chr15:55620400-55658000 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr15:55620800-55636800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr15:55621600-55636800 Strong transcription Primary monocytes fromperipheralblood blood
20 chr15:55623000-55652600 Weak transcription Psoas Muscle Psoas
21 chr15:55623400-55642200 Weak transcription Hela-S3 cervix
22 chr15:55623800-55660200 Weak transcription Brain Inferior Temporal Lobe brain
23 chr15:55624000-55642800 Weak transcription Esophagus oesophagus
24 chr15:55624200-55640400 Weak transcription Spleen Spleen
25 chr15:55625000-55636600 Strong transcription Primary T helper cells PMA-I stimulated --
26 chr15:55625200-55639000 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr15:55625200-55643000 Strong transcription Primary T cells from cord blood blood
28 chr15:55625800-55637000 Strong transcription Primary B cells from cord blood blood
29 chr15:55626000-55636600 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr15:55626000-55649600 Weak transcription HUVEC blood vessel
31 chr15:55628400-55636400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr15:55628400-55639800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr15:55628600-55647800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr15:55628800-55636200 Weak transcription Fetal Heart heart
35 chr15:55628800-55636400 Weak transcription K562 blood
36 chr15:55629000-55636400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr15:55629400-55636400 Strong transcription Primary hematopoietic stem cells blood
38 chr15:55629800-55640200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr15:55630000-55695000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr15:55630200-55649000 Weak transcription Osteobl bone
41 chr15:55630400-55644400 Weak transcription A549 lung
42 chr15:55630400-55654600 Weak transcription Fetal Muscle Trunk muscle
43 chr15:55630400-55675600 Weak transcription Rectal Smooth Muscle rectum
44 chr15:55630600-55640400 Weak transcription Thymus Thymus
45 chr15:55630600-55648000 Weak transcription HepG2 liver
46 chr15:55630600-55655800 Weak transcription Brain Angular Gyrus brain
47 chr15:55630600-55660200 Weak transcription Brain Cingulate Gyrus brain
48 chr15:55630600-55663200 Weak transcription Fetal Lung lung
49 chr15:55630600-55667800 Weak transcription Colon Smooth Muscle Colon
50 chr15:55630600-55668400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015