The 2.0 version of rSNPBase

Variant report

Variant rs58743089
Chromosome Location chr15:55661157-55661158
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55611800-55699400 Weak transcription Colonic Mucosa Colon
2 chr15:55612000-55665000 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr15:55612000-55671000 Weak transcription Right Ventricle heart
4 chr15:55612000-55671000 Weak transcription Small Intestine intestine
5 chr15:55612600-55663600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr15:55612600-55675600 Weak transcription Aorta Aorta
7 chr15:55612800-55677600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr15:55630000-55695000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr15:55630400-55675600 Weak transcription Rectal Smooth Muscle rectum
10 chr15:55630600-55663200 Weak transcription Fetal Lung lung
11 chr15:55630600-55667800 Weak transcription Colon Smooth Muscle Colon
12 chr15:55630600-55668400 Weak transcription Brain Substantia Nigra brain
13 chr15:55630800-55683600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr15:55631000-55667800 Weak transcription Brain Hippocampus Middle brain
15 chr15:55631200-55663200 Weak transcription Pancreas Pancrea
16 chr15:55631200-55674000 Weak transcription Placenta Placenta
17 chr15:55633600-55667200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr15:55635800-55675200 Weak transcription Fetal Brain Male brain
19 chr15:55636600-55678200 Weak transcription Fetal Thymus thymus
20 chr15:55636800-55666200 Weak transcription Brain Germinal Matrix brain
21 chr15:55637000-55663000 Weak transcription K562 blood
22 chr15:55637000-55663400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr15:55637000-55671400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr15:55637000-55699600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr15:55637400-55680200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr15:55641000-55667800 Weak transcription Spleen Spleen
27 chr15:55641000-55668000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr15:55641000-55671600 Weak transcription Thymus Thymus
29 chr15:55643000-55664000 Weak transcription GM12878-XiMat blood
30 chr15:55645000-55665000 Weak transcription Fetal Intestine Small intestine
31 chr15:55645000-55667800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr15:55645000-55680800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr15:55645600-55681400 Weak transcription Stomach Mucosa stomach
34 chr15:55647800-55695400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr15:55648200-55666200 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr15:55648800-55675800 Weak transcription Dnd41 blood
37 chr15:55649200-55681000 Weak transcription HSMM muscle
38 chr15:55649800-55695800 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr15:55650000-55662600 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr15:55650400-55662400 Weak transcription Osteobl bone
41 chr15:55650400-55663400 Weak transcription NH-A brain
42 chr15:55650800-55680800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr15:55651000-55662400 Weak transcription HepG2 liver
44 chr15:55651000-55665000 Weak transcription A549 lung
45 chr15:55651000-55675200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr15:55652800-55675800 Weak transcription NHDF-Ad bronchial
47 chr15:55653000-55663400 Weak transcription Fetal Kidney kidney
48 chr15:55653000-55663400 Weak transcription HUVEC blood vessel
49 chr15:55653000-55667400 Weak transcription Ovary ovary
50 chr15:55653000-55667800 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015