The 2.0 version of rSNPBase

Variant report

Variant rs7168455
Chromosome Location chr15:55692574-55692575
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55611800-55699400 Weak transcription Colonic Mucosa Colon
2 chr15:55630000-55695000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr15:55637000-55699600 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr15:55647800-55695400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr15:55649800-55695800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr15:55668200-55699800 Weak transcription Spleen Spleen
7 chr15:55670200-55695000 Weak transcription Colon Smooth Muscle Colon
8 chr15:55671800-55695800 Weak transcription HSMMtube muscle
9 chr15:55672200-55696000 Weak transcription Brain Substantia Nigra brain
10 chr15:55676000-55695000 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr15:55676000-55699400 Weak transcription Brain Cingulate Gyrus brain
12 chr15:55676200-55695200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr15:55676200-55695800 Weak transcription Brain Hippocampus Middle brain
14 chr15:55676400-55697200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr15:55676400-55699400 Weak transcription Right Ventricle heart
16 chr15:55676800-55695800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr15:55676800-55697600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr15:55677000-55695600 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr15:55678200-55699400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr15:55679400-55696800 Weak transcription Primary T cells fromperipheralblood blood
21 chr15:55679600-55694400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr15:55679600-55695000 Weak transcription Fetal Intestine Large intestine
23 chr15:55681000-55695000 Weak transcription Primary B cells from peripheral blood blood
24 chr15:55681000-55695800 Weak transcription Rectal Smooth Muscle rectum
25 chr15:55681000-55697400 Weak transcription Gastric stomach
26 chr15:55681000-55699200 Weak transcription Lung lung
27 chr15:55681000-55699600 Weak transcription Fetal Stomach stomach
28 chr15:55681200-55693800 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr15:55681200-55694000 Weak transcription Liver Liver
30 chr15:55681200-55694200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr15:55681200-55694400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr15:55681200-55695000 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr15:55681200-55695600 Weak transcription Fetal Intestine Small intestine
34 chr15:55681200-55699400 Weak transcription Stomach Smooth Muscle stomach
35 chr15:55681400-55695800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr15:55681600-55695600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr15:55681800-55695200 Weak transcription Stomach Mucosa stomach
38 chr15:55681800-55699600 Weak transcription NHLF lung
39 chr15:55682600-55695200 Weak transcription Primary T cells from cord blood blood
40 chr15:55687400-55695200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr15:55687400-55696800 Weak transcription Psoas Muscle Psoas
42 chr15:55687400-55699400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr15:55687400-55699400 Weak transcription Fetal Brain Female brain
44 chr15:55687400-55699600 Weak transcription Left Ventricle heart
45 chr15:55687800-55694800 Weak transcription Primary B cells from cord blood blood
46 chr15:55688000-55693200 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr15:55688000-55693800 Weak transcription Primary hematopoietic stem cells blood
48 chr15:55688000-55694000 Weak transcription Hela-S3 cervix
49 chr15:55689000-55693600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr15:55689000-55694200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015