The 2.0 version of rSNPBase

Variant report

Variant rs71476718
Chromosome Location chr15:55629804-55629805
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55611800-55640000 Weak transcription Gastric stomach
2 chr15:55611800-55699400 Weak transcription Colonic Mucosa Colon
3 chr15:55612000-55630600 Weak transcription Ovary ovary
4 chr15:55612000-55635400 Weak transcription Fetal Brain Female brain
5 chr15:55612000-55636000 Weak transcription H1 Cell Line embryonic stem cell
6 chr15:55612000-55636000 Weak transcription Brain Germinal Matrix brain
7 chr15:55612000-55636400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr15:55612000-55665000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr15:55612000-55671000 Weak transcription Right Ventricle heart
10 chr15:55612000-55671000 Weak transcription Small Intestine intestine
11 chr15:55612400-55631000 Weak transcription HSMMtube muscle
12 chr15:55612400-55635600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr15:55612600-55630000 Weak transcription Brain Angular Gyrus brain
14 chr15:55612600-55640400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:55612600-55650200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr15:55612600-55663600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr15:55612600-55675600 Weak transcription Aorta Aorta
18 chr15:55612800-55631400 Weak transcription NH-A brain
19 chr15:55612800-55635800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr15:55612800-55640400 Weak transcription NHLF lung
21 chr15:55612800-55649600 Weak transcription Muscle Satellite Cultured Cells --
22 chr15:55612800-55677600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr15:55613600-55631800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr15:55614800-55649000 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr15:55617000-55635400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr15:55617000-55635600 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr15:55617400-55631200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
28 chr15:55618800-55633800 Weak transcription Stomach Mucosa stomach
29 chr15:55619600-55630800 Strong transcription Stomach Smooth Muscle stomach
30 chr15:55619600-55633600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr15:55619600-55633800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr15:55619600-55640000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr15:55619800-55632200 Strong transcription Adipose Nuclei Adipose
34 chr15:55619800-55635400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr15:55619800-55636000 Weak transcription HMEC breast
36 chr15:55619800-55637600 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr15:55620400-55658000 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr15:55620800-55636800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr15:55621000-55635200 Strong transcription Primary neutrophils fromperipheralblood blood
40 chr15:55621600-55636800 Strong transcription Primary monocytes fromperipheralblood blood
41 chr15:55621800-55635400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr15:55623000-55652600 Weak transcription Psoas Muscle Psoas
43 chr15:55623400-55642200 Weak transcription Hela-S3 cervix
44 chr15:55623600-55630200 Weak transcription Brain Cingulate Gyrus brain
45 chr15:55623600-55635600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr15:55623600-55636000 Weak transcription NHDF-Ad bronchial
47 chr15:55623800-55635600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr15:55623800-55660200 Weak transcription Brain Inferior Temporal Lobe brain
49 chr15:55624000-55635800 Weak transcription NHEK skin
50 chr15:55624000-55642800 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015