The 2.0 version of rSNPBase

Variant report

Variant rs73406928
Chromosome Location chr15:55685894-55685895
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55611800-55699400 Weak transcription Colonic Mucosa Colon
2 chr15:55630000-55695000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr15:55637000-55699600 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr15:55647800-55695400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr15:55649800-55695800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr15:55667600-55687000 Weak transcription Pancreas Pancrea
7 chr15:55668200-55699800 Weak transcription Spleen Spleen
8 chr15:55669400-55687200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr15:55669400-55690400 Weak transcription Fetal Heart heart
10 chr15:55670200-55695000 Weak transcription Colon Smooth Muscle Colon
11 chr15:55670800-55687000 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr15:55671800-55690400 Weak transcription Brain Angular Gyrus brain
13 chr15:55671800-55695800 Weak transcription HSMMtube muscle
14 chr15:55672000-55687000 Weak transcription Small Intestine intestine
15 chr15:55672200-55696000 Weak transcription Brain Substantia Nigra brain
16 chr15:55676000-55687000 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr15:55676000-55695000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr15:55676000-55699400 Weak transcription Brain Cingulate Gyrus brain
19 chr15:55676200-55686600 Weak transcription K562 blood
20 chr15:55676200-55695200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr15:55676200-55695800 Weak transcription Brain Hippocampus Middle brain
22 chr15:55676400-55697200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr15:55676400-55699400 Weak transcription Right Ventricle heart
24 chr15:55676800-55686200 Weak transcription Left Ventricle heart
25 chr15:55676800-55686400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr15:55676800-55688600 Weak transcription Aorta Aorta
27 chr15:55676800-55695800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr15:55676800-55697600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr15:55677000-55686400 Weak transcription Fetal Muscle Trunk muscle
30 chr15:55677000-55695600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr15:55678200-55699400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr15:55679400-55696800 Weak transcription Primary T cells fromperipheralblood blood
33 chr15:55679600-55689600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr15:55679600-55694400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr15:55679600-55695000 Weak transcription Fetal Intestine Large intestine
36 chr15:55679800-55687000 Weak transcription Fetal Brain Female brain
37 chr15:55681000-55686600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr15:55681000-55688600 Weak transcription Adipose Nuclei Adipose
39 chr15:55681000-55695000 Weak transcription Primary B cells from peripheral blood blood
40 chr15:55681000-55695800 Weak transcription Rectal Smooth Muscle rectum
41 chr15:55681000-55697400 Weak transcription Gastric stomach
42 chr15:55681000-55699200 Weak transcription Lung lung
43 chr15:55681000-55699600 Weak transcription Fetal Stomach stomach
44 chr15:55681200-55686000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr15:55681200-55686600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr15:55681200-55689800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr15:55681200-55693800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr15:55681200-55694000 Weak transcription Liver Liver
49 chr15:55681200-55694200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr15:55681200-55694400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015