The 2.0 version of rSNPBase

Variant report

Variant rs73421665
Chromosome Location chr15:55675369-55675370
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55611800-55699400 Weak transcription Colonic Mucosa Colon
2 chr15:55612600-55675600 Weak transcription Aorta Aorta
3 chr15:55612800-55677600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr15:55630000-55695000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr15:55630400-55675600 Weak transcription Rectal Smooth Muscle rectum
6 chr15:55630800-55683600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr15:55636600-55678200 Weak transcription Fetal Thymus thymus
8 chr15:55637000-55699600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr15:55637400-55680200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr15:55645000-55680800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr15:55645600-55681400 Weak transcription Stomach Mucosa stomach
12 chr15:55647800-55695400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr15:55648800-55675800 Weak transcription Dnd41 blood
14 chr15:55649200-55681000 Weak transcription HSMM muscle
15 chr15:55649800-55695800 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr15:55650800-55680800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr15:55652800-55675800 Weak transcription NHDF-Ad bronchial
18 chr15:55659600-55682000 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr15:55661200-55680800 Weak transcription NHLF lung
20 chr15:55662200-55681600 Weak transcription Esophagus oesophagus
21 chr15:55664000-55675400 Weak transcription Fetal Lung lung
22 chr15:55664200-55681200 Weak transcription NH-A brain
23 chr15:55665800-55676800 Weak transcription HepG2 liver
24 chr15:55665800-55680800 Weak transcription A549 lung
25 chr15:55666000-55681200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr15:55666200-55675400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr15:55666200-55680600 Weak transcription Muscle Satellite Cultured Cells --
28 chr15:55666200-55684000 Weak transcription HUVEC blood vessel
29 chr15:55666600-55675600 Weak transcription GM12878-XiMat blood
30 chr15:55667200-55675400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr15:55667600-55681800 Strong transcription Primary monocytes fromperipheralblood blood
32 chr15:55667600-55682000 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr15:55667600-55687000 Weak transcription Pancreas Pancrea
34 chr15:55668200-55675400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr15:55668200-55699800 Weak transcription Spleen Spleen
36 chr15:55669200-55675400 Weak transcription Brain Hippocampus Middle brain
37 chr15:55669200-55682600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr15:55669400-55687200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr15:55669400-55690400 Weak transcription Fetal Heart heart
40 chr15:55669800-55675800 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr15:55670000-55675400 Weak transcription Brain Inferior Temporal Lobe brain
42 chr15:55670000-55675400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr15:55670000-55675600 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr15:55670000-55681800 Weak transcription Psoas Muscle Psoas
45 chr15:55670200-55679200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr15:55670200-55695000 Weak transcription Colon Smooth Muscle Colon
47 chr15:55670800-55687000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr15:55671800-55675400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr15:55671800-55675400 Weak transcription Duodenum Mucosa Duodenum
50 chr15:55671800-55675400 Weak transcription Left Ventricle heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015