Variant report

Variant	rs61869182
Chromosome Location	chr10:97795599-97795600
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:97793006..97795682-chr10:97800634..97803734,3	K562	blood:
2	chr10:97793928..97795682-chr10:97800634..97802290,2	K562	blood:
3	chr10:97793353..97796377-chr10:97800032..97805188,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000226688	Chromatin interaction
ENSG00000107443	Chromatin interaction

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10509698	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10509702	0.90[EUR][1000 genomes]
rs10509705	0.90[EUR][1000 genomes]
rs1414916	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1556745	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17383897	0.86[EUR][1000 genomes]
rs17385450	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17468599	0.86[EUR][1000 genomes]
rs17476608	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17476713	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2861240	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34965352	0.96[EUR][1000 genomes]
rs3789925	0.96[EUR][1000 genomes]
rs41291594	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41291606	0.81[EUR][1000 genomes]
rs4917721	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4918987	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61729856	0.90[EUR][1000 genomes]
rs61731060	0.92[EUR][1000 genomes]
rs61858614	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61858615	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61858616	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61858617	1.00[EUR][1000 genomes]
rs61858618	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61858619	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61858638	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61858640	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61858641	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61858642	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61858643	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61858644	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61858646	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61858649	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61858650	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61858652	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61858654	0.92[EUR][1000 genomes]
rs61858657	0.92[EUR][1000 genomes]
rs61858658	0.92[EUR][1000 genomes]
rs61859661	0.90[EUR][1000 genomes]
rs61859662	0.88[EUR][1000 genomes]
rs61869171	0.86[EUR][1000 genomes]
rs61869174	0.82[EUR][1000 genomes]
rs61869176	0.86[EUR][1000 genomes]
rs61869177	0.85[EUR][1000 genomes]
rs61869178	0.82[EUR][1000 genomes]
rs61869179	0.86[EUR][1000 genomes]
rs61869180	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61869181	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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