The 2.0 version of rSNPBase

Variant report

Variant rs6478995
Chromosome Location chr9:102792856-102792857
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:102729600-102826800 Weak transcription HMEC breast
2 chr9:102766400-102794800 Weak transcription Muscle Satellite Cultured Cells --
3 chr9:102766800-102793000 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr9:102767000-102799400 Weak transcription Spleen Spleen
5 chr9:102767000-102820400 Weak transcription Colonic Mucosa Colon
6 chr9:102767200-102821800 Weak transcription Rectal Smooth Muscle rectum
7 chr9:102767600-102796000 Weak transcription Gastric stomach
8 chr9:102767600-102799400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr9:102767600-102800400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr9:102767600-102826400 Weak transcription Small Intestine intestine
11 chr9:102767600-102845600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr9:102767800-102830000 Weak transcription HSMMtube muscle
13 chr9:102767800-102835600 Weak transcription Brain Hippocampus Middle brain
14 chr9:102771400-102816200 Weak transcription NH-A brain
15 chr9:102774000-102807400 Weak transcription Fetal Kidney kidney
16 chr9:102778400-102799600 Weak transcription Fetal Stomach stomach
17 chr9:102778400-102799800 Weak transcription Esophagus oesophagus
18 chr9:102778400-102813200 Weak transcription HUVEC blood vessel
19 chr9:102778600-102796600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr9:102778800-102801800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr9:102780400-102793200 Weak transcription Fetal Muscle Trunk muscle
22 chr9:102780800-102796200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr9:102781000-102795000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr9:102781800-102799600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr9:102781800-102811000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr9:102782000-102796600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr9:102782000-102799400 Weak transcription Fetal Muscle Leg muscle
28 chr9:102782000-102813000 Weak transcription HSMM muscle
29 chr9:102782400-102796200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr9:102782600-102794800 Weak transcription Fetal Lung lung
31 chr9:102782600-102795000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr9:102782600-102812400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr9:102782600-102813200 Weak transcription Placenta Placenta
34 chr9:102783600-102793000 Weak transcription Lung lung
35 chr9:102783600-102795000 Weak transcription Aorta Aorta
36 chr9:102783600-102796800 Weak transcription HepG2 liver
37 chr9:102783600-102807400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr9:102783800-102793000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr9:102783800-102793000 Weak transcription Ovary ovary
40 chr9:102783800-102794600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr9:102783800-102795000 Weak transcription Duodenum Mucosa Duodenum
42 chr9:102783800-102795000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr9:102783800-102795600 Weak transcription Fetal Thymus thymus
44 chr9:102783800-102799400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr9:102783800-102799400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr9:102783800-102799600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr9:102783800-102799600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr9:102783800-102814000 Weak transcription Osteobl bone
49 chr9:102783800-102819200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr9:102784000-102793000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015