Variant report

Variant	rs1999877
Chromosome Location	chr9:102973719-102973720
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:45972474..45973351-chr9:102973302..102973822,4	HCT-116	colon:

Variant related genes	Relation type
ENSG00000264920	Chromatin interaction

Extended variants
information (count: 209 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:203)

rs_ID	r²[population]
rs10116798	0.93[ASN][1000 genomes]
rs10117150	0.93[ASN][1000 genomes]
rs1014651	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1014652	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10739795	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs10739796	0.82[JPT][hapmap];0.94[ASN][1000 genomes]
rs10760710	0.85[ASN][1000 genomes]
rs10760711	0.89[ASN][1000 genomes]
rs10760712	0.85[ASN][1000 genomes]
rs10760720	0.93[ASN][1000 genomes]
rs10819714	0.89[ASN][1000 genomes]
rs10819715	0.89[ASN][1000 genomes]
rs10819716	0.85[ASN][1000 genomes]
rs10819717	0.85[ASN][1000 genomes]
rs10819719	0.84[ASN][1000 genomes]
rs10819737	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10819739	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10819759	0.83[CHD][hapmap]
rs10988945	0.96[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs10988963	0.85[ASN][1000 genomes]
rs10988968	0.91[ASN][1000 genomes]
rs10988969	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10988973	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.95[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10988974	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10989009	0.93[ASN][1000 genomes]
rs10989064	0.83[CHD][hapmap]
rs1099908	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1099909	0.83[ASN][1000 genomes]
rs1099910	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12336751	0.82[JPT][hapmap];0.93[ASN][1000 genomes]
rs12552646	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.82[JPT][hapmap];0.90[MEX][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12685650	0.89[ASN][1000 genomes]
rs13301295	0.93[ASN][1000 genomes]
rs1338119	0.89[ASN][1000 genomes]
rs1338121	0.89[CEU][hapmap];0.83[CHD][hapmap];0.88[GIH][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1338123	0.82[JPT][hapmap]
rs1338124	0.82[JPT][hapmap]
rs1338125	0.82[CHD][hapmap];0.82[JPT][hapmap]
rs1338126	0.82[EUR][1000 genomes]
rs1342147	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.95[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.89[ASN][1000 genomes]
rs1361668	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1406613	0.85[ASN][1000 genomes]
rs1415926	0.82[JPT][hapmap];0.91[ASN][1000 genomes]
rs1418267	0.85[ASN][1000 genomes]
rs1529191	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.89[ASN][1000 genomes]
rs1529192	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs1529193	0.85[ASN][1000 genomes]
rs1534726	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1535667	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1539297	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1572607	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1578644	0.85[ASN][1000 genomes]
rs1578645	0.85[ASN][1000 genomes]
rs1578646	0.89[ASN][1000 genomes]
rs1852864	0.85[ASN][1000 genomes]
rs1852865	0.85[ASN][1000 genomes]
rs1891334	0.81[ASN][1000 genomes]
rs1930243	0.83[CHD][hapmap];0.82[JPT][hapmap]
rs2057476	0.96[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2065997	0.89[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.95[MEX][hapmap];0.81[EUR][1000 genomes]
rs2093696	0.89[ASN][1000 genomes]
rs2096158	0.85[ASN][1000 genomes]
rs2104273	0.85[ASN][1000 genomes]
rs2151131	0.83[CHD][hapmap]
rs2181579	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2209082	0.83[ASN][1000 genomes]
rs2245216	0.82[JPT][hapmap]
rs2476439	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2476441	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs2476442	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2485745	0.83[CHD][hapmap]
rs2491095	0.89[ASN][1000 genomes]
rs2491096	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2491098	0.82[EUR][1000 genomes]
rs2698999	0.84[ASN][1000 genomes]
rs2761053	0.85[ASN][1000 genomes]
rs2761056	0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs2787361	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.89[ASN][1000 genomes]
rs2787363	0.82[JPT][hapmap];0.91[ASN][1000 genomes]
rs2787364	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2787365	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.89[MEX][hapmap];0.89[ASN][1000 genomes]
rs2787366	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.89[ASN][1000 genomes]
rs2787368	0.83[CHD][hapmap]
rs2787372	0.82[CHD][hapmap]
rs2787374	0.89[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.95[MEX][hapmap]
rs2787375	0.83[CHD][hapmap];0.82[JPT][hapmap]
rs2787379	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2787380	0.82[JPT][hapmap]
rs2787382	0.89[CEU][hapmap];0.82[EUR][1000 genomes]
rs2787384	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2787386	0.81[EUR][1000 genomes]
rs2787390	0.83[CHD][hapmap]
rs2787391	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2787393	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2787394	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2787395	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.89[MEX][hapmap];0.84[ASN][1000 genomes]
rs2787396	1.00[CEU][hapmap];0.85[CHB][hapmap];0.82[JPT][hapmap];0.85[YRI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2787397	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.84[ASN][1000 genomes]
rs2791335	0.84[ASN][1000 genomes]
rs2791336	0.89[ASN][1000 genomes]
rs2791337	0.89[ASN][1000 genomes]
rs2795575	0.89[ASN][1000 genomes]
rs2806681	0.88[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2806682	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2806683	0.91[ASN][1000 genomes]
rs2806684	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2806685	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2806687	0.88[ASW][hapmap];1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2806688	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2806689	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2806690	0.82[EUR][1000 genomes]
rs2806691	0.88[CEU][hapmap];0.83[CHD][hapmap];0.91[GIH][hapmap];0.95[MEX][hapmap];0.82[EUR][1000 genomes]
rs2806693	0.83[CHD][hapmap]
rs2806695	0.82[JPT][hapmap]
rs2806696	0.82[JPT][hapmap]
rs2806699	0.89[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.95[MEX][hapmap];0.80[EUR][1000 genomes]
rs2806702	0.83[CHD][hapmap]
rs2806703	0.83[CHD][hapmap];0.94[GIH][hapmap];0.82[JPT][hapmap];0.95[MEX][hapmap]
rs28448789	0.85[ASN][1000 genomes]
rs3813712	0.83[CHD][hapmap]
rs41346545	0.89[ASN][1000 genomes]
rs4237194	0.83[CHD][hapmap]
rs4237195	0.83[CHD][hapmap]
rs4495492	0.82[ASN][1000 genomes]
rs4503155	0.85[ASN][1000 genomes]
rs4517187	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4742779	0.96[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs4743375	0.85[ASN][1000 genomes]
rs4743376	0.85[ASN][1000 genomes]
rs4743379	0.85[ASN][1000 genomes]
rs4743380	0.85[ASN][1000 genomes]
rs4743381	0.83[ASN][1000 genomes]
rs4743382	0.89[ASN][1000 genomes]
rs4743386	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6478991	0.85[ASN][1000 genomes]
rs6478994	0.85[ASN][1000 genomes]
rs6478995	0.85[ASN][1000 genomes]
rs6478996	0.85[ASN][1000 genomes]
rs6478997	0.85[ASN][1000 genomes]
rs6478998	0.85[ASN][1000 genomes]
rs6479000	0.85[ASN][1000 genomes]
rs6479001	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs6479002	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs6479013	0.83[CHD][hapmap]
rs7018981	0.91[ASN][1000 genomes]
rs7022493	0.85[ASN][1000 genomes]
rs7024016	0.85[ASN][1000 genomes]
rs7025300	0.85[ASN][1000 genomes]
rs7026532	0.85[ASN][1000 genomes]
rs7027414	0.91[CHD][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs7029020	0.85[ASN][1000 genomes]
rs7029048	0.85[ASN][1000 genomes]
rs7032333	0.85[ASN][1000 genomes]
rs7033091	1.00[CHD][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs7036518	0.86[ASN][1000 genomes]
rs7037362	0.85[ASN][1000 genomes]
rs7041338	0.85[ASN][1000 genomes]
rs7042194	0.89[ASN][1000 genomes]
rs7042912	0.85[ASN][1000 genomes]
rs7043057	0.85[ASN][1000 genomes]
rs7044219	0.85[ASN][1000 genomes]
rs7047092	0.88[ASN][1000 genomes]
rs7846794	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs7847213	0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs7853485	0.84[ASN][1000 genomes]
rs7856844	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7857530	0.85[ASN][1000 genomes]
rs7858606	0.89[ASN][1000 genomes]
rs7859492	0.94[ASN][1000 genomes]
rs7861003	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs7862460	0.89[ASN][1000 genomes]
rs7864494	0.83[CHD][hapmap];0.82[JPT][hapmap]
rs7870585	0.88[ASN][1000 genomes]
rs7873746	1.00[CHD][hapmap]
rs7874449	0.86[ASN][1000 genomes]
rs7874900	0.83[CHD][hapmap]
rs846752	0.82[JPT][hapmap];0.93[ASN][1000 genomes]
rs846753	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs846754	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs846755	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs846756	1.00[CHD][hapmap];0.82[GIH][hapmap];0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs846758	0.85[ASN][1000 genomes]
rs846759	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs846761	0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs846762	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs846763	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs846765	0.82[ASN][1000 genomes]
rs846766	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.90[MEX][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs846768	0.93[ASN][1000 genomes]
rs846769	0.93[ASN][1000 genomes]
rs846770	0.82[JPT][hapmap];0.93[ASN][1000 genomes]
rs860171	0.82[JPT][hapmap];0.91[ASN][1000 genomes]
rs863668	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs914711	0.83[CHD][hapmap]
rs9299337	0.84[ASN][1000 genomes]
rs9408993	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9408995	0.91[ASN][1000 genomes]
rs9409325	0.84[ASN][1000 genomes]
rs942163	0.89[ASN][1000 genomes]
rs944710	0.83[CHD][hapmap]
rs946054	0.82[JPT][hapmap]
rs9695692	0.93[ASN][1000 genomes]
rs9886877	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529618	chr9:102227922-103044018	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv531599	chr9:102227922-103156864	Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
3	nsv893623	chr9:102648036-103405197	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
4	nsv1048674	chr9:102752236-103038259	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
5	nsv1052007	chr9:102766948-103033937	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
6	esv2761274	chr9:102972481-102993911	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs1999877	INVS	cis	multi-tissue	Pritchard
rs1999877	STX17	cis	Esophagus Mucosa	GTEx

Chromatin state (count:66 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102940400-102978000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr9:102953000-102976800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr9:102953800-102977600	Weak transcription	Fetal Stomach	stomach
4	chr9:102954600-102978000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr9:102955000-102988400	Weak transcription	Dnd41	blood
6	chr9:102955200-102999600	Weak transcription	Lung	lung
7	chr9:102956200-102983400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr9:102957400-102977800	Weak transcription	Aorta	Aorta
9	chr9:102958800-103014400	Weak transcription	Hela-S3	cervix
10	chr9:102959000-102984400	Weak transcription	HepG2	liver
11	chr9:102959800-102977600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr9:102959800-102977600	Weak transcription	Ovary	ovary
13	chr9:102959800-102994600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr9:102960800-102978000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr9:102962000-102989200	Weak transcription	Fetal Lung	lung
16	chr9:102964800-102988400	Weak transcription	Fetal Intestine Large	intestine
17	chr9:102965400-102976400	Weak transcription	Fetal Heart	heart
18	chr9:102967600-102975600	Weak transcription	HSMM	muscle
19	chr9:102967600-102977800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr9:102967600-102978400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr9:102967600-102988600	Weak transcription	Muscle Satellite Cultured Cells	--
22	chr9:102969800-102978600	Weak transcription	Right Ventricle	heart
23	chr9:102972000-102988400	Weak transcription	Fetal Intestine Small	intestine
24	chr9:102972400-102977600	Weak transcription	Left Ventricle	heart
25	chr9:102972400-102988400	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr9:102972400-102991400	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr9:102972400-103017200	Weak transcription	Spleen	Spleen
28	chr9:102972400-103035200	Weak transcription	Esophagus	oesophagus
29	chr9:102972600-102976000	Weak transcription	Primary T cells from cord blood	blood
30	chr9:102972600-102976400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr9:102972600-102977200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr9:102972600-102977800	Weak transcription	Fetal Kidney	kidney
33	chr9:102972600-102978800	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr9:102972600-102988000	Weak transcription	Liver	Liver
35	chr9:102972600-102988400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr9:102972600-102988600	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr9:102972600-102998800	Weak transcription	Thymus	Thymus
38	chr9:102972600-103027200	Weak transcription	Rectal Smooth Muscle	rectum
39	chr9:102972600-103046600	Weak transcription	Psoas Muscle	Psoas
40	chr9:102972800-102973800	Weak transcription	Pancreatic Islets	Pancreatic Islet
41	chr9:102972800-102977800	Weak transcription	Primary B cells from cord blood	blood
42	chr9:102972800-102977800	Weak transcription	Adipose Nuclei	Adipose
43	chr9:102972800-102986600	Weak transcription	Primary B cells from peripheral blood	blood
44	chr9:102972800-102987800	Weak transcription	Primary T cells fromperipheralblood	blood
45	chr9:102972800-102988400	Weak transcription	Duodenum Mucosa	Duodenum
46	chr9:102972800-102989000	Weak transcription	Primary T helper cells PMA-I stimulated	--
47	chr9:102973000-102973800	Enhancers	Brain Hippocampus Middle	brain
48	chr9:102973000-102976800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
49	chr9:102973000-102978200	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr9:102973000-102980800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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