The 2.0 version of rSNPBase

Variant report

Variant rs2806683
Chromosome Location chr9:102988988-102988989
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:102955200-102999600 Weak transcription Lung lung
2 chr9:102958800-103014400 Weak transcription Hela-S3 cervix
3 chr9:102959800-102994600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr9:102962000-102989200 Weak transcription Fetal Lung lung
5 chr9:102972400-102991400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr9:102972400-103017200 Weak transcription Spleen Spleen
7 chr9:102972400-103035200 Weak transcription Esophagus oesophagus
8 chr9:102972600-102998800 Weak transcription Thymus Thymus
9 chr9:102972600-103027200 Weak transcription Rectal Smooth Muscle rectum
10 chr9:102972600-103046600 Weak transcription Psoas Muscle Psoas
11 chr9:102972800-102989000 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr9:102973000-103008000 Weak transcription HUVEC blood vessel
13 chr9:102973000-103014600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr9:102973000-103027400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr9:102973000-103053800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr9:102973200-102991000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr9:102973800-102991000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr9:102974000-102998600 Weak transcription Fetal Brain Female brain
19 chr9:102974000-103014000 Weak transcription Brain Substantia Nigra brain
20 chr9:102974000-103014600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr9:102974000-103047600 Weak transcription Fetal Brain Male brain
22 chr9:102974200-103014600 Weak transcription Brain Angular Gyrus brain
23 chr9:102974600-102989200 Weak transcription Colon Smooth Muscle Colon
24 chr9:102974600-102998600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr9:102975800-103045800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr9:102976200-102998800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr9:102976600-103006400 Weak transcription NHLF lung
28 chr9:102976800-102989400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr9:102976800-102990600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr9:102976800-102998800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr9:102976800-103047800 Weak transcription Fetal Heart heart
32 chr9:102977000-103014600 Weak transcription NH-A brain
33 chr9:102977600-102998800 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr9:102978000-102999000 Weak transcription Brain Germinal Matrix brain
35 chr9:102978200-102989200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr9:102978200-102989200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr9:102978400-102999000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr9:102978400-102999000 Weak transcription Aorta Aorta
39 chr9:102978400-103013000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr9:102979000-102989200 Weak transcription Fetal Kidney kidney
41 chr9:102979200-102989200 Weak transcription A549 lung
42 chr9:102979200-102990800 Weak transcription Primary B cells from cord blood blood
43 chr9:102979400-102999000 Weak transcription Right Ventricle heart
44 chr9:102979400-103054600 Weak transcription NHEK skin
45 chr9:102979600-103005200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr9:102980000-102991000 Weak transcription Fetal Muscle Trunk muscle
47 chr9:102980000-102991200 Weak transcription Primary T cells from cord blood blood
48 chr9:102981800-102998800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr9:102981800-102999000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr9:102984000-103005200 Weak transcription HSMM muscle

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Last update: Aug 31, 2015