Variant report

Variant	rs1529191
Chromosome Location	chr9:102845908-102845909
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:102833241..102834792-chr9:102845640..102848020,2	K562	blood:
2	chr9:102832276..102834231-chr9:102845616..102848202,2	MCF-7	breast:
3	chr9:102845337..102851064-chr9:102859939..102862983,5	MCF-7	breast:
4	chr9:102832400..102834792-chr9:102845793..102848020,2	K562	blood:
5	chr9:102845199..102847988-chr9:102855038..102857684,2	MCF-7	breast:
6	chr9:102836320..102838449-chr9:102843922..102846451,2	K562	blood:

Variant related genes	Relation type
ENSG00000119509	Chromatin interaction
ENSG00000023318	Chromatin interaction

Extended variants
information (count: 192 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:187)

rs_ID	r²[population]
rs10116798	0.89[ASN][1000 genomes]
rs10117150	0.89[ASN][1000 genomes]
rs1014651	0.86[CHB][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs1014652	1.00[CHD][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs10156395	0.86[ASN][1000 genomes]
rs10512268	0.86[YRI][hapmap]
rs10739795	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.96[ASN][1000 genomes]
rs10739796	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs10760700	0.81[YRI][hapmap]
rs10760704	0.86[YRI][hapmap]
rs10760710	0.96[ASN][1000 genomes]
rs10760711	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10760712	0.96[ASN][1000 genomes]
rs10760720	0.89[ASN][1000 genomes]
rs10819714	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10819715	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10819716	0.96[ASN][1000 genomes]
rs10819717	0.96[ASN][1000 genomes]
rs10819719	0.95[ASN][1000 genomes]
rs10819737	0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs10819739	0.93[ASN][1000 genomes]
rs10988934	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10988945	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10988963	0.96[ASN][1000 genomes]
rs10988968	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10988969	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10988973	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10988974	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10989009	0.89[ASN][1000 genomes]
rs1099910	0.86[ASN][1000 genomes]
rs11555502	0.82[ASN][1000 genomes]
rs12336751	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12552646	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12685650	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13301295	0.89[ASN][1000 genomes]
rs1338119	0.86[ASN][1000 genomes]
rs1338121	0.84[CEU][hapmap];0.83[CHD][hapmap];0.88[GIH][hapmap]
rs1338125	0.82[CHD][hapmap]
rs1342147	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1361668	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1406613	0.96[ASN][1000 genomes]
rs1415926	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1418267	0.96[ASN][1000 genomes]
rs1529192	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.96[ASN][1000 genomes]
rs1529193	0.96[ASN][1000 genomes]
rs1534726	0.82[JPT][hapmap];0.95[ASN][1000 genomes]
rs1535667	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1539297	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.95[YRI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1572607	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.91[ASN][1000 genomes]
rs1578644	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1578645	0.96[ASN][1000 genomes]
rs1578646	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1830454	0.86[YRI][hapmap]
rs1852863	0.86[YRI][hapmap]
rs1852864	0.96[ASN][1000 genomes]
rs1852865	0.96[ASN][1000 genomes]
rs1891334	0.88[ASN][1000 genomes]
rs1997367	0.86[YRI][hapmap]
rs1997368	0.86[YRI][hapmap]
rs1999877	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.89[ASN][1000 genomes]
rs2057476	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2093696	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2096158	0.96[ASN][1000 genomes]
rs2104273	0.96[ASN][1000 genomes]
rs2181579	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2209082	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2416935	0.82[YRI][hapmap]
rs2476439	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2476441	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.89[ASN][1000 genomes]
rs2476442	0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs2485745	0.84[CHD][hapmap];0.85[JPT][hapmap]
rs2491095	0.86[ASN][1000 genomes]
rs2491096	0.86[ASN][1000 genomes]
rs2698999	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2761053	0.93[ASN][1000 genomes]
rs2761056	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2787361	1.00[CHD][hapmap];0.82[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs2787363	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs2787364	0.96[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.87[ASN][1000 genomes]
rs2787365	1.00[CHD][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.86[ASN][1000 genomes]
rs2787366	1.00[CHD][hapmap];0.82[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs2787382	0.84[CEU][hapmap]
rs2787384	0.84[CEU][hapmap]
rs2787390	0.83[CHD][hapmap]
rs2787391	0.82[JPT][hapmap]
rs2787393	0.84[ASN][1000 genomes]
rs2787394	0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs2787395	1.00[CHD][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.81[ASN][1000 genomes]
rs2787396	0.96[CEU][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs2787397	1.00[CHD][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2791335	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2791336	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2791337	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2795575	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2806681	0.81[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.87[ASN][1000 genomes]
rs2806682	0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs2806683	0.84[ASN][1000 genomes]
rs2806684	0.95[CEU][hapmap];0.82[JPT][hapmap];0.87[ASN][1000 genomes]
rs2806685	0.84[ASN][1000 genomes]
rs2806687	0.81[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.84[ASN][1000 genomes]
rs2806688	0.82[ASN][1000 genomes]
rs2806691	0.84[CEU][hapmap];0.84[CHD][hapmap];0.91[GIH][hapmap];0.94[MEX][hapmap]
rs2806693	0.84[CHD][hapmap];0.85[JPT][hapmap]
rs2806694	0.85[JPT][hapmap]
rs28448789	0.96[ASN][1000 genomes]
rs35493819	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3824510	0.86[ASN][1000 genomes]
rs41346545	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4495492	0.93[ASN][1000 genomes]
rs4503155	0.96[ASN][1000 genomes]
rs4517187	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.82[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4742779	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4743375	0.96[ASN][1000 genomes]
rs4743376	0.96[ASN][1000 genomes]
rs4743378	0.86[ASN][1000 genomes]
rs4743379	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4743380	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4743381	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4743382	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4743384	0.88[ASN][1000 genomes]
rs4743386	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6478991	0.96[ASN][1000 genomes]
rs6478994	0.96[ASN][1000 genomes]
rs6478995	0.96[ASN][1000 genomes]
rs6478996	0.96[ASN][1000 genomes]
rs6478997	0.96[ASN][1000 genomes]
rs6478998	0.96[ASN][1000 genomes]
rs6479000	0.96[ASN][1000 genomes]
rs6479001	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs6479002	1.00[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.93[ASN][1000 genomes]
rs7018981	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7022493	0.96[ASN][1000 genomes]
rs7024016	0.96[ASN][1000 genomes]
rs7025300	0.96[ASN][1000 genomes]
rs7026532	0.96[ASN][1000 genomes]
rs7027414	0.91[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.96[ASN][1000 genomes]
rs7029020	0.96[ASN][1000 genomes]
rs7029048	0.96[ASN][1000 genomes]
rs7032333	0.96[ASN][1000 genomes]
rs7033091	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.96[ASN][1000 genomes]
rs7036518	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7037362	0.96[ASN][1000 genomes]
rs7038506	0.84[YRI][hapmap]
rs7039716	0.82[YRI][hapmap]
rs7041338	0.96[ASN][1000 genomes]
rs7042194	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7042912	0.96[ASN][1000 genomes]
rs7043057	0.96[ASN][1000 genomes]
rs7044219	0.96[ASN][1000 genomes]
rs7045612	0.86[ASN][1000 genomes]
rs7047092	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7846794	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs7847213	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs7853485	0.95[ASN][1000 genomes]
rs7856844	0.93[ASN][1000 genomes]
rs7857530	0.96[ASN][1000 genomes]
rs7858606	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7859492	0.87[ASN][1000 genomes]
rs7861003	1.00[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs7862460	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7870585	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7873746	1.00[CHD][hapmap];0.85[JPT][hapmap]
rs7874449	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs846752	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs846753	1.00[CHD][hapmap];0.82[JPT][hapmap];0.87[ASN][1000 genomes]
rs846754	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs846755	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs846756	1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs846758	0.93[ASN][1000 genomes]
rs846759	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs846761	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs846762	0.96[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.95[YRI][hapmap];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs846763	0.86[ASN][1000 genomes]
rs846766	0.81[ASW][hapmap];0.92[CEU][hapmap];0.86[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.98[TSI][hapmap];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs846768	0.89[ASN][1000 genomes]
rs846769	0.89[ASN][1000 genomes]
rs846770	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs860171	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs863668	0.93[ASN][1000 genomes]
rs9299337	0.81[ASN][1000 genomes]
rs9408993	0.88[EUR][1000 genomes]
rs9408995	0.84[ASN][1000 genomes]
rs9409325	0.81[ASN][1000 genomes]
rs942163	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9556	0.91[YRI][hapmap]
rs9695692	0.89[ASN][1000 genomes]
rs9886877	1.00[CHD][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529618	chr9:102227922-103044018	Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv531599	chr9:102227922-103156864	Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
3	nsv893623	chr9:102648036-103405197	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
4	nsv1048674	chr9:102752236-103038259	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
5	nsv1052007	chr9:102766948-103033937	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs1529191	STX17	cis	Esophagus Mucosa	GTEx
rs1529191	INVS	cis	multi-tissue	Pritchard
rs1529191	CTSL2	cis	cerebellum	SCAN

Chromatin state (count:90 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102800000-102860200	Weak transcription	Esophagus	oesophagus
2	chr9:102820800-102846000	Weak transcription	Primary T cells from cord blood	blood
3	chr9:102822000-102849000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr9:102825800-102858200	Weak transcription	Fetal Intestine Small	intestine
5	chr9:102829200-102850600	Weak transcription	Aorta	Aorta
6	chr9:102829400-102848800	Weak transcription	Duodenum Mucosa	Duodenum
7	chr9:102829400-102849200	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr9:102829400-102849600	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr9:102829400-102849800	Weak transcription	Stomach Mucosa	stomach
10	chr9:102836000-102859000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr9:102836800-102849000	Weak transcription	Fetal Lung	lung
12	chr9:102837000-102849800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr9:102837000-102859600	Weak transcription	Brain Anterior Caudate	brain
14	chr9:102837200-102860200	Weak transcription	Primary T cells fromperipheralblood	blood
15	chr9:102837600-102846200	Weak transcription	Brain Cingulate Gyrus	brain
16	chr9:102838800-102852200	Weak transcription	Adipose Nuclei	Adipose
17	chr9:102839000-102846000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr9:102839000-102846000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr9:102839600-102846000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr9:102839600-102860000	Weak transcription	Fetal Stomach	stomach
21	chr9:102839800-102860200	Weak transcription	Right Atrium	heart
22	chr9:102840600-102855600	Weak transcription	Lung	lung
23	chr9:102842000-102850200	Enhancers	Primary T helper cells PMA-I stimulated	--
24	chr9:102842200-102850600	Weak transcription	Left Ventricle	heart
25	chr9:102842200-102855600	Weak transcription	Gastric	stomach
26	chr9:102842400-102851600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
27	chr9:102842600-102851400	Weak transcription	Psoas Muscle	Psoas
28	chr9:102843200-102846000	Weak transcription	Brain Angular Gyrus	brain
29	chr9:102843200-102850200	Weak transcription	Spleen	Spleen
30	chr9:102843200-102851800	Enhancers	Primary T helper cells fromperipheralblood	blood
31	chr9:102843600-102848000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
32	chr9:102844000-102851200	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr9:102844000-102851400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
34	chr9:102844200-102846400	Enhancers	NHLF	lung
35	chr9:102844600-102846400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr9:102844600-102846400	Enhancers	NHDF-Ad	bronchial
37	chr9:102844600-102846600	Enhancers	Brain Hippocampus Middle	brain
38	chr9:102844800-102846000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr9:102844800-102846000	Enhancers	NHEK	skin
40	chr9:102844800-102846200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr9:102844800-102847000	Flanking Active TSS	GM12878-XiMat	blood
42	chr9:102844800-102847800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
43	chr9:102844800-102850000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
44	chr9:102844800-102851600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
45	chr9:102845000-102846000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr9:102845000-102846000	Weak transcription	HSMMtube	muscle
47	chr9:102845000-102850600	Weak transcription	Pancreas	Pancrea
48	chr9:102845200-102846000	Enhancers	Muscle Satellite Cultured Cells	--
49	chr9:102845200-102848600	Weak transcription	Hela-S3	cervix
50	chr9:102845400-102846000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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