Variant report

Variant rs12552646
Chromosome Location chr9:102868475-102868476
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:102862200-102876800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr9:102862200-102876800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr9:102862200-102879800 Weak transcription Esophagus oesophagus
4 chr9:102862200-102881000 Weak transcription Gastric stomach
5 chr9:102862200-102902400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr9:102862400-102870000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr9:102862400-102881400 Weak transcription Colonic Mucosa Colon
8 chr9:102862800-102868800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr9:102862800-102870600 Weak transcription Fetal Brain Female brain
10 chr9:102862800-102872400 Weak transcription Fetal Heart heart
11 chr9:102862800-102873400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr9:102862800-102875400 Weak transcription Small Intestine intestine
13 chr9:102862800-102877600 Weak transcription Stomach Mucosa stomach
14 chr9:102862800-102881800 Weak transcription Right Ventricle heart
15 chr9:102862800-102887400 Weak transcription Pancreas Pancrea
16 chr9:102863400-102869800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:102863400-102871800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr9:102863400-102874200 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr9:102863600-102869200 Strong transcription Primary hematopoietic stem cells blood
20 chr9:102863600-102869400 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr9:102863600-102869600 Strong transcription Fetal Muscle Leg muscle
22 chr9:102863600-102870200 Strong transcription Skeletal Muscle Female skeletal muscle
23 chr9:102863600-102871400 Strong transcription Fetal Lung lung
24 chr9:102863600-102872000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr9:102863800-102870000 Strong transcription Fetal Muscle Trunk muscle
26 chr9:102863800-102871800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr9:102864200-102869400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr9:102865600-102870400 Strong transcription Liver Liver
29 chr9:102865600-102871400 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr9:102865800-102871800 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr9:102866000-102869400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr9:102866200-102869000 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr9:102866200-102869000 Strong transcription Hela-S3 cervix
34 chr9:102866200-102869400 Strong transcription Rectal Smooth Muscle rectum
35 chr9:102866200-102869800 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr9:102866200-102870000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr9:102866200-102870200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr9:102866200-102870400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr9:102866200-102870600 Strong transcription Primary B cells from peripheral blood blood
40 chr9:102866200-102870600 Strong transcription Fetal Thymus thymus
41 chr9:102866200-102871200 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr9:102866200-102871200 Strong transcription NHDF-Ad bronchial
43 chr9:102866200-102872000 Strong transcription HSMM muscle
44 chr9:102866200-102874800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr9:102866400-102868800 Strong transcription Primary T cells from cord blood blood
46 chr9:102866400-102868800 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr9:102866400-102869000 Strong transcription Placenta Amnion Placenta Amnion
48 chr9:102866400-102869000 Strong transcription Psoas Muscle Psoas
49 chr9:102866400-102869000 Strong transcription K562 blood
50 chr9:102866400-102869200 Strong transcription Lung lung

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